>PF05150 (304 residues) TVPCERTAWDFGVQALYLQPTLSAGNGYDFYNTDFNGVRRYHDFDPDWGWGFKLEGSYHF HTGNDLTVSWYHMNKSTDNHFGDFVLPNLNIVTANGIQLGNSLRTSFEPKWDAVNVELGQ HVDFSEWKVIRFHGGVQYARIEHDYDANLTTPVSFPRYGVVAGVPFRLASAETKFNGFGP RVGADMSYNLGNGFAVYANGATALLIGQGKFRSSFGYVPSLTTPLFGIPGHGSKTTMVPE MEAKLGAKYTYAMAQGDLTLDAGYMWVNYWNANHILVGHSDGTYSSRESNFALSGPYVGL KWVG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TVPCERTAWDFGVQALYLQPTLSAGNGYDFYNTDFNGVRRYHDFDPDWGWGFKLEGSYHFHTGNDLTVSWYHMNKSTDNHFGDFVLPNLNIVTANGIQLGNSLRTSFEPKWDAVNVELGQHVDFSEWKVIRFHGGVQYARIEHDYDANLTTPVSFPRYGVVAGVPFRLASAETKFNGFGPRVGADMSYNLGNGFAVYANGATALLIGQGKFRSSFGYVPSLTTPLFGIPGHGSKTTMVPEMEAKLGAKYTYAMAQGDLTLDAGYMWVNYWNANHILVGHSDGTYSSRESNFALSGPYVGLKWVG | |||||||||||||||||||
1 | 1k24A | 0.11 | 0.09 | 0.77 | 1.00 | DEthreader | -----QTANEFTVHTDLSSISSTR-AF-------------LKEKHKAA-KHIGVRADIPFDANQGIRLEAGFGRS-KKNII---NLETKL------------K-PGVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKT-------------------TKHTLHSSRQSWLAKVHADLLSQLGNGWYINPWSEVKFDNSRYKLNTGV---------TNLKKDIN-QKTNGWGFGLG-ANIGKKLG--ESASIEAGPFYKQRTYKESGFSVTGDVSLTIPKTSIREYGLRVGIKF-- | |||||||||||||
2 | 1i78A | 0.09 | 0.08 | 0.88 | 1.17 | DEthreader | ST--TPDNINADISLGTLSGKTK----ERVYLEG-RKVS-QLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTGSRGGNMV---DQDWMD--------TDEARHPTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQ-ESRYSFTARGGSYYSSEG--DDIGSFPNERAIGYKQR-FKMPYIGLTGSYR-YEDFELGGTFKYSGWVESSDNDEHYDPK-----G--RITYRS-KVKDQNYYSVAVNAGYYVTP---NAKVYVEGAWNRVTNKKGNTSLYDSDYSNGAGIENYNFITTAGLKYTF | |||||||||||||
3 | 1i78A | 0.10 | 0.09 | 0.91 | 1.03 | HHpred | ETLSFPDNINADISLGTLSGKTKE-RVYLAE--E--GGRKVSQLDWKFNAIIKGAINWDLMPQISIGAAGWTLGSRGGNVDQDWMDSS----NPG--TWTDARHPDTQLNANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIYSSEEDDIGSFPNGERAIGYKQRFK--MPYIGLTGSYRY-EDFELGGTFKYSGWVESSD-NDEHYDPG--R--I--TY--RSKVKDQNYYSVAVNAGYYVT---PNAKVYVEGAWNRVTNKKGNTSYNNNTSKNGAGIENYNFITTAGLKYT- | |||||||||||||
4 | 1i78A | 0.09 | 0.09 | 0.94 | 1.00 | DisCoVER | STEFTPDNINADISLGTLSGKTKERV-Y-LAEEGGRKVSQLDWKFN-NAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMVDQDWMDSSNP--GTWTDEARHPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTA-RGGSYIYSSEEGFRDDIGSFPERAIGYKQRFKMPYIGLTGSYRY-EDFELGGTFKYSGWVESSDNDEHYDP-------KGRITYR-SKVKDQNYYSVAVNAGYYV---TPNAKVYVEGAWNRVTNKKGNTSLYDHNSKNGAGIENYNFITTAGLKYT- | |||||||||||||
5 | 1i78A | 0.08 | 0.08 | 0.91 | 0.35 | MRFsearch | ---FTPDNINADISLGTLSGK---TKERVYLAEEGGRKVSQLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGS-----RGGNMVDQDWMDSSNPGTWTDEARHPLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFK--MPYIGLTGSYRYE-DFELGGTFKYSGWVESSDNDEHYDP----KGRITYRSK----VKDQNYYSVAVNAGYYVT---PNAKVYVEGAWNRVTNKKGNTSLYDNTSDYSAGIENYNFITTAGLKYT- | |||||||||||||
6 | 1i78A | 0.09 | 0.08 | 0.91 | 1.08 | SPARKS-K | NINADISLGTLSGKTKERVYLAEEGGRKVSQLDNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMVDQDWMDSSNPGTWT----------------DEARHPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRYED-FELGGTFKYSGWVESSDNDEHYDPKG--------RITYRSKVKDQNYYSVAVNAGYYVTPN---AKVYVEGAWNRVTNKKGNTSLYDHNNNTSDYSGIENYNFITTAGLKY | |||||||||||||
7 | 1i78A | 0.09 | 0.08 | 0.91 | 1.05 | MAPalign | -LSFTPDNINADISLGTLSGKTK----ERVYLAEEGGRKVQLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTSRGGNMVD------QDWMDSSNPGTWTDEARHDTQLYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIY--SSEEGFRDDIGSFERAIGYKQRFKMPYIGLTGSYRY-EDFELGGTFKYSWVESSDNDEHYD----------PKGRITYRSKVDQNYYSVAVNAGYYV---TPNAKVYVEGAWNRVTNKGNTSLYDNNNTSDYSGIENYNFITTAGLKYTF | |||||||||||||
8 | 2x4mA | 0.11 | 0.10 | 0.92 | 0.72 | CEthreader | IPNISPDSFTVAASTGMLSG----KSHEMLYDAETGRKISQLDWKIKNVAILKGDISWDPYSFLTLNARGWTSLASGSGNMDDYAWMNENQSEWTDHSSHPATNVNHANEY---DLNVKGWLLQDENYKAGITAGYQETRFSW---TATGGSYSYNNGAYTGNFPKGVRVIGYNQRFSMPYIGLAGQYRI-NDFELNALFKFSDWVRAHDNDEHYMRDLTFR----------EKTSGSRYYGTVINAGYYVTPN---AKVFAEFTYSKYDEGKKNSGDSVSIGGDAAGISNKNYTVTAGLQYRF | |||||||||||||
9 | 1i78A | 0.09 | 0.08 | 0.93 | 0.95 | MUSTER | ETLSTPDNINADISLGTLSGKT---KERVYLAEEGGRKVSQLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMV-----MDSSNPGTWTDEARHPDTQLNY-ANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRYED-FELGGTFKYSGWVESSDNDEHYDPKGR--------ITYRSKVKDQNYYSVAVNAGYYVT---PNAKVYVEGAWNRVTNKTSLYDHNNNTSDYSKNGENYNFITTAGLKYTF | |||||||||||||
10 | 1i78A | 0.10 | 0.09 | 0.91 | 2.23 | HHsearch | ETLSFPDNINADISLGTLSGKTKE-RVYLAEE----GGRKVSQLDWKFNAIIKGAINWDLMPQISIGAAGWTLGSRGGNVDQD-------WMDSSNPGTTDARHPDTQLNANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIYSSEEDDIGSFPNGERAIGYKQRFK--MPYIGLTGSYRY-EDFELGGTFKYSGWVESSD-NDEHYDPG----R--ITY--RSKVKDQNYYSVAVNAGYYVT---PNAKVYVEGAWNRVTNKKGNTSLYDNNNKNGAGIENYNFITTAGLKYTF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |