Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LQSQRLGEEARRLIDTQRRRQAEKVVERFQWIGAGVIAVTPLPVVDVLATAAVNAQMVVEIGKIYGCELNLERGQELAMSLAKTLAGLGIVEGAIKLISTALQLTVATFLIGKAIQGVSAAYLTRIAGKSFIEYFRQNQDWGDGGMTEVVQRQFQLVK |
1 | 2j69A | 0.06 | 0.05 | 0.88 | 1.17 | DEthreader | | VPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGYITDKSAAWTLTAEKDINAAFKELSAGLAGFDWKNILLNYFTVIGIGGIITAVTGILLGPIGFATKELVKHLPQVAHEQSQVVYNAVKECFDSYEREV------------------- |
2 | 2w6dA2 | 0.06 | 0.06 | 0.88 | 1.17 | DEthreader | | IDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYLKSAAWTLTAEKDINAAFKELSRSASAMGLFALAAGF-DWKNILLNYFTVIGIGGITAVTGILLELKHLPQVAHEQSQVVYNAVKECFDSYEREVSKRI-D----------------- |
3 | 1tq6A | 0.08 | 0.07 | 0.92 | 1.88 | HHsearch | | YDFPVLMDKITDSVIEKKRQFLKQRIWLEGFA-ADLVNIIPSLTFLLDSDLETLKKSMKFYRTVFGVDETSLQRLARVEAMIKSPAVFDEETIQERLSRYIQEFC---LANGYLLPKNSFLKEIFYLKYYFLDMVTE-------DAKTLLKEICLRN- |
4 | 2w6dA2 | 0.08 | 0.06 | 0.82 | 1.00 | DEthreader | | --------FN-LTIRDEFQKEIINTRDTQARTISESFRSYLKSAAWTLTAEKDINAAFKELSRSASAMGLFALAAGF-DWKNILLNYFTVIGGGIITAVTGILELVKHLPQVAHEQSQVVYNAVKECFDSYEREVSKRI-D----------------- |
5 | 2j69A1 | 0.06 | 0.05 | 0.88 | 1.17 | DEthreader | | VPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGYITDKSAAWTLTAEKDINAAFKELSAGLAGFDWKNILLNYFTVIGIGGIITAVTGILLGPIGFATKELVKHLPQVAHEQSQVVYNAVKECFDSYEREV------------------- |
6 | 2w6dA | 0.06 | 0.05 | 0.89 | 1.17 | DEthreader | | EPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGFYIDKSAAWTLTAEKDINAAFKELSAGGFAGFD-WKNILLNYFTVIGIGGIITAVTGILLGPLTKKELVKHLPQVAHEQSQVVYNAVKECFDSYEREVSK----------------- |
7 | 1tq6A2 | 0.06 | 0.04 | 0.71 | 1.44 | HHsearch | | -----------------------------------LVNIIPSLTFLLDSDLETLKKSMKFYRTVFGVDETSLQRLAWVEAMIKSAVFKPTDTIQERLSRYIQEFC---LANGYLLPKNSFLKEIFYLKYYFLDMVTE-------DAKTLLKEICLRN- |
8 | 2j69A | 0.06 | 0.05 | 0.88 | 1.00 | DEthreader | | -EGSGRLVLKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQIEINAAFKELSRSASQYGASYNQITDQD-EEDNSPGWAKWAGLSGFDWKNILLNYFTVIGIGIEQSQVVYNAVKECFDSYEREVSKRINDDIVSRKEL-L-LQ--------------- |
9 | 2w6dA | 0.07 | 0.06 | 0.87 | 1.00 | DEthreader | | VPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGFYIDKSAAWTLTAEKDINAAFKELSMGGFAGFD-WKNILLNYFTVIGIGGITAVTGILLIRLVTAKKLVKHLPQVAHEQSQVVYNAVKECFDSYEREV------------------- |
10 | 6j72A | 0.05 | 0.04 | 0.83 | 1.00 | DEthreader | | QALWQVLSDGIADLTADVDHDLRHRFRIIAAHTEKVIDGCDHWAEIGAELEDAVATAVGDNFVWAYQ----GML-TSF-AGLGMFN-P--LSLGA-GFVLGRKEDMNRMLRVRNEAKANVRKFVDDVAFVVGKESRDRLKG----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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