>PF05124 (224 residues) ENVGGDYGYAELVISKDLKKLELDEEYVTDWKAYAVLNDNGTMKLEDDLNDNNVDKVVGI ALRYDGDKLDDLDSGDEVDILDYVKFKLDDEDSNDKLKVYFSMDKDVDATLNIGEKVKAL NAEVKLKDIKANAVEPVSLTAPIAKLDTEVSLDTADKNLVLVGGPVANKLTKELVDAGKL ALDNNSPATIALIPDAANGHDVIVVAGGDREKTREAALELIKNL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ENVGGDYGYAELVISKDLKKLELDEEYVTDWKAYAVLNDNGTMKLEDDLNDNNVDKVVGIALRYDGDKLDDLDSGDEVDILDYVKFKLDDEDSNDKLKVYFSMDKDVDATLNIGEKVKALNAEVKLKDIKANAVEPVSLTAPIAKLDTEVSLDTADKNLVLVGGPVANKLTKELVDAGKLALDNNSPATIALIPDAANGHDVIVVAGGDREKTREAALELIKNL | |||||||||||||||||||
1 | 6eznG1 | 0.04 | 0.02 | 0.54 | 0.64 | DisCoVER | DNIIFENEGNILC------MSSPGAVPGIYPSHVIRDPSSEELVVSSYVYNAEDFVFGESSAALLEN-----------QIVPILNAPRFTESKSWTSGSQGFLVVGFQNLNNARL---VWIG-SSDFNSNFAKELLKWTFNE-----------------------K---------------------------------------------------------- | |||||||||||||
2 | 2nlzD | 0.04 | 0.03 | 0.67 | 0.67 | DEthreader | ----PTSNGISAFALV---------------LNGSGRPYGVPVT------------VPGAPGAAAKLPAAAIREALRIESNGESFY---------------ELADQIH-------GYLTKEDCYRPEWVEPIIVSFIQSNMGF----IPGFLTKPIGPFGVMGFMQPQGHMQVMMNTLAAPREPVVDAFGRGQIIWRLAGGTEPRT------------------ | |||||||||||||
3 | 1j4wA | 0.10 | 0.06 | 0.63 | 0.57 | CEthreader | ----------------------------GSHMIDVPIPRF-AVGIVIGRNGEMIKKIQNDAGVRIQF--------------------KPDDGTTPERIAQITGPPDRAQHAA---------------------EIITDLLRSVQQEFNFIVPTGKTGLIIGKGGETIKSISQQSG------------ARIELQRNADPNMKLFTIRG-TPQQIDYARQLIEEKI | |||||||||||||
4 | 6i3rA | 0.09 | 0.06 | 0.68 | 0.57 | EigenThreader | QFCAKSQIEPKFDIRQTG------PKNRQRFLCEVRVEPNTYIGVGNSTNKKDAEK------NACRDFVNYLVRVGK----------LNTNDVPA---------DAGAF---DVNAA-----IHGN-------------WTNI-----YKQTNNIRDDYKYTPVG---------------PEHARSFLAELSIYPALNRTVTARESGSNKKSASKSCALSLVRQ | |||||||||||||
5 | 4c90A | 0.19 | 0.10 | 0.51 | 0.59 | HHpred | ---------------------------------------------------------------------------------------------------FVIFTPANHFPLVANGV--P--CPIYIDSSEAQDILQVCGKKPELLTS------TSSKRCIIAGTYGT-PFIKKLMSAGKIDKKENEKYILQVIANPCEGDEAVVIIGSDRRGTIYGIYELSEQM | |||||||||||||
6 | 4zmhA1 | 0.15 | 0.08 | 0.50 | 0.62 | MRFsearch | ------------------------------------------------------------------------------------------------------------ISFKANGGVRLADEEHLASLLVTNDYKGLQRAAPTLHSQLK----DAGRHAVIIGSVGRSGLIQLLVEQNKLNVADIEAYKLVVVDKPFPIEKALVIAGS-DRGAIFGVYDLSQQI | |||||||||||||
7 | 4zmhA1 | 0.16 | 0.09 | 0.55 | 0.47 | FFAS-3D | ---------------------------------------------------------------------------------------------------YISFKANGGVRLADEEHLVDTNDYKGLQRAAADLQTDQRVTGKLPTLHSQLK--DAGRHAVIIGSVGRSGLIQLLVEQNKLNVADIEGQKLVVVDKPFPNIEKALVIAGSDRGAIFGVYDLSQQI | |||||||||||||
8 | 5njlA | 0.14 | 0.12 | 0.88 | 0.59 | SPARKS-K | GSQVGQPIY-EIKVGETVNALGENK------ELIVTITDKGHITN------SANEVVAEATEKYENSADTEKAKTETNGIYKVADVKASYDSAKDKLVITLRDKTDKTIEIGIGDEKIDLTANPVDTNLDPSVAGAKNIDDVAEITIKNSDLNTVS----------PQDLGNMVANSDISSKDSETKFTIKYTD-ASGKAIELTVESTNEKDLKDAKAALE--- | |||||||||||||
9 | 4zmhA | 0.20 | 0.06 | 0.29 | 0.71 | CNFpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------HAVIIGSVGRSGLIQLLVEQNKLNVAD-EAYKLVVVDKPFNIEKALVIAGSDMRGAIFGVYDLSQQI | |||||||||||||
10 | 5g2rA | 0.10 | 0.07 | 0.67 | 0.67 | DEthreader | VVSYEALGKVL---------APDPLPPYPA---------------------------------SVKDGYAVVITESRA------GNDGGV----AYVTTGRDI-----VLTTGE--ILLATAGV-------------VYPMPIVAILRDLEAVSSG-VDIILTSGGVSDFVKPLLEEKGKVYFSKVKLTFAEIRA-KPGKTVLAFGLPSCLVCFNFVVPTIRQL | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |