>PF05085 (265 residues) KLLIDEEETVQIKDLNKVTTVNNTDLLLLDDGAASSNAITFKNFLKTVNHQTFKGEELGY FKEIIKSTIATELAADKDFIKSIYDLIVDKLIENESSKLSNLFSKIKSRLTDSISSATLS RSDDLLIMPSSDTIQKTPVPKHILGVPSNFTYGSITRSTTLYPSDYENKAISINMEDNDD VTLIFYKNYDNDPIYLDIEIQVKINDNRMQKKSLKLMYSDEITYNWVYEITGPRGLFTRT PIYNGWYIQKRASLYGDSVPDLLKL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | KLLIDEEETVQIKDLNKVTTVNNTDLLLLDDGAASSNAITFKNFLKTVNHQTFKGEELGYFKEIIKSTIATELAADKDFIKSIYDLIVDKLIENESSKLSNLFSKIKSRLTDSISSATLSRSDDLLIMPSSDTIQKTPVPKHILGVPSNFTYGSITRSTTLYPSDYENKAISINMEDNDDVTLIFYKNYDNDPIYLDIEIQVKINDNRMQKKSLKLMYSDEITYNWVYEITGPRGLFTRTPIYNGWYIQKRASLYGDSVPDLLKL | |||||||||||||||||||
1 | 2aukA | 0.07 | 0.04 | 0.62 | 0.64 | DisCoVER | AAAE---SSIQVK-NKGSIKL--SNVKSVVNSSGKLVITSRNT-------------------------------------------EL--KL-IDEGRTK--------------ESYKVPYGAVLAKGDAGGETVANWDP-HTMPVI--TEVSGFV---------------RFTDMIDG-QTITRQTD-TGLSSLVVLDSRTAGG------KDLRPA---------LKIVIPGTDMPAQYFLPGKAIVQLEGVQISSGDTLARI- | |||||||||||||
2 | 1ktaA | 0.04 | 0.03 | 0.68 | 0.67 | DEthreader | EMTKPHKKP---------GKTFTDHM---------LFEGMK--AFKGKDQQVR-------LF-RP-WLNMDRMLRASFDKLELLECIRRLIEVDK-------VRPVLIGNEQ------VILCPV-------------GAYFPSVTPV-SLLA-DPAFIRTVQQAL--GCEQVLWLYGQ-TETMN-------------TPPLNGV--------PGVRQSLLDMAQVVERTITM---KQLVVFGSCQVCPVHRILYKDRNLHITM-- | |||||||||||||
3 | 5jp0A2 | 0.11 | 0.11 | 1.00 | 0.70 | CEthreader | PNANSMRCLNGGWSYSWQGHVADEYAQAYHTIYEALCEKYGKENIIYEPGVTYASYKNDNWWEENKPETEKPVAAAAQADIIITCIGENSYCETPGNLTDLTLSENQRNLVKALAATGKPIVLVLNQGRPRIINIMLPSNYGGDALPFTYPRLINALATYDYKPCENMMDIQWPFTNYKYSNLKVNKPTFNADDELIFTVDVTNTGKVAGKESVLLFSKDLVRLRNFEKVSLEPGETKTVTLKLKGSDLAFVGYDGKWRLEKGDF | |||||||||||||
4 | 5efvA | 0.08 | 0.07 | 0.89 | 0.70 | EigenThreader | GSMSN----KLITDLSR-----------VFDYRYVDEN------EYNFKLISDMLTDFNFSLEYHRNKSDFLTYLNGRFSNMVLGYHDYSTLDVFTKKVEKAVDEHYKEYRATEYRFEPKEQEPEFITDLSPYTNAVMQSFWVDPRTKIPTERQLKNSLNFVDIDDKVLYQMDIPMDTQPMQGIYDAG-----ILYWYTGDS----NTANPNYLQGFDIKTKLLFKRRIDIGGVNFQEAEGLDMYALLIGVTIGPGNNRHHSIYS | |||||||||||||
5 | 2gb7B | 0.19 | 0.06 | 0.29 | 0.33 | HHpred | ---------------EEVNRTREMYLATLDDSFSNNRVLTFEDMLQSAMELSRNNVSYDSEKEEIQQSILKQIYSDFPYVVNYYRNRLSALFD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2gb7B | 0.21 | 0.06 | 0.26 | 0.38 | MRFsearch | -----------------------MYLATLDDSFSEERVLTFEDMLQSAMELSRKWSYTDSEKEEIQQSILKQIEKDFPYVVNYYRNRLSALFD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4jlrS | 0.16 | 0.04 | 0.26 | 0.52 | FFAS-3D | ----------------------------------------FDKFVEAAKNK------FDKFKADMKKLARKEAEQARRAVRNRLSELLSKINNDQKKLMSNDVLKFAAEAEKKIEA----------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 3pubA | 0.10 | 0.08 | 0.79 | 0.77 | SPARKS-K | -------------------------VPNDILEEQLYNSIVYDSAVEKSKHLYEEKKS-----EVITNVVNKLIRNNKMNCMEYAYQLWLQ---GSKDIVRDCFVEFRLIFAENAIKLMYKRDGLALTLSNDVH---GNDGRLAFGDGKD---KTSPKVSWKFIALWENNKVYFKILNTERQYLVLGVGTNPNMAFGVWYLQPAKYDKDNLFYIYNLTLSRTSGNRMAWGYNGRVIGS---PEHYAWGVKAF-------------- | |||||||||||||
9 | 1qs2A | 0.15 | 0.12 | 0.80 | 0.55 | CNFpred | KMLIDNGYMVHVDKVSKVVKK-GVECLQIEGT-----LKKSLDFKNDIN-AEAHSWGMKNYEEWAKDLTDSQREALDGYARQDYKEINNYLRN-GNEKLDAQIKNISDALGKK------PIPENITVYRWCDPLPSLKFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAASEKEILLDKDSKYHID------KVTEVIIK--GVKRYVVDATLLTN------------------------------ | |||||||||||||
10 | 3iiiA | 0.06 | 0.04 | 0.73 | 0.83 | DEthreader | ---QHLLGNPKLTVTHVNE------VDSVQ---YGNQE-------NKPKN--GALWPTLGTIPTSSFTSPDPGFWV--PNDYV-------------------------NGV-IPWECASFFKQ--WLYVYNRTPISALNAEYTPLY---LNA---EN-HTLNHAKI--S-SAHVAQYDSDVSFKYTFDKDTELVGNNLKLWVSTK-DSDDDLFAGIKKLDEVQVATGWLRVSKLSEIVPVEIELLPSGTLFK-------L--IPI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |