Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TTINLFTYKPPPNTVCDDDIDKQNFFIQGVLEALNDNSKSKQACFLELKREQCLLLRKIKHDLLYSCEGNYCQNHVLLDALHLYKLYKEEFDDTQSAFDIDLMQTCREIVYLTFELFSCAANIVVFVHASANYKDNVLAQLLVELQSKNFITL |
1 | 4c0dA | 0.07 | 0.06 | 0.89 | 1.00 | DEthreader | | ----------LYHCVSQRACYHLDFVRLIALLVKHSGEANTVTKINLLNKVLGIVVGVLLQDHDVRQEFQ--QLPYHRIFIMLLLELNAPEHVLET-INFQTLTAFCNTFHILRPKAPGFVYALEL----HRIFIARMLGMYAQLLIDLYLGV |
2 | 5k7vA | 0.08 | 0.08 | 0.93 | 1.17 | DEthreader | | KAAAIIA--------FMARAIAILAKIAIYRLADNHTTTFMARAIAAIANLAVTAILAIAALASNHTEFARAISAIAELAKKAIEAIYRLADNHTTKFMAAAIEAIALLATLAILAIALASAISAAE---KKAIEAIYRIAIEKIARKIKAIA |
3 | 4rvdA2 | 0.07 | 0.04 | 0.54 | 0.58 | DisCoVER | | -KRIAGYG-AP-AKGNLNVCG-LTADLEFCD-TTEF----KQGLVL--PG--TH--I----------------------------------------PV---R--SPEYAK------TQAIDYYLLLAWNYGEEIL---AKEGPFLADGGRF- |
4 | 6c0fz | 0.05 | 0.05 | 0.88 | 1.00 | DEthreader | | ------------K--MPQQR-ANELGEL-HGLYFDP-KDTLTTNDKAFIKFSRGFWKVMCFEWFNIDRLDKYLLLIRRVLFSQ-LKYLQSRNWD-KKLVDEYIKKVLRLPLSGSPVYTGIPIVDLDERLEIAAKKTPLADVIAIFQDIVLIDL |
5 | 6sciA | 0.07 | 0.07 | 0.99 | 0.61 | CEthreader | | GTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLLKEYLPASYHEG--SKNPVARERVHSAATIAGIAFANAFSMAHKLGSQFHIPHGLANALLICNVIRYNANQ |
6 | 6vp9B3 | 0.05 | 0.05 | 0.92 | 0.73 | EigenThreader | | ----------RMGGFFNSGCSQCQISSFYLVNDIYDTMEIQERIENSFKSLLDQLKDVFSKCKPTLLENLVFFVETISVILWVSSYCESVLRPYLIIMPPVFTSFQDYVTGLQTLISNV--VDHIKGLETHLISPEVQGKVQSSYLHSLLEMG |
7 | 5frpA | 0.16 | 0.12 | 0.80 | 0.36 | HHpred | | ----------------LDQDNTDLTGLDKYRDALVSKHKDVGCCLSDITDIFKLVLSQ-FEQLGDQENGYHIQQTYLITKLLEYRSIVLLADL----------PSSNNLLIELFHIFYDPNKILGISEFDSVPLEV-LRLIFNKFLTYNP--- |
8 | 6bq1A | 0.11 | 0.08 | 0.76 | 0.42 | MRFsearch | | ------------------------GGGGGMMQCVIAVADKVFDAFLNMMADKAKELERHAQFLLVNFN--HIHKRIRRVADKYLSGLVDKFPH--LLWSGTVLKTMLDILQTLSLSLSADAPYRITVPDTYEARESIVKDFAARC-------- |
9 | 4d10B1 | 0.18 | 0.13 | 0.73 | 0.59 | FFAS-3D | | ------------------KEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINMMNRYKQLLTYIRSAVTRNYSILDYISFYETTLEALKDAKN--DRLWFKTNTKLGKLYLE----------------REEYGKLQKILRQLHQS----- |
10 | 5cwfA | 0.15 | 0.14 | 0.96 | 0.67 | SPARKS-K | | MKKVMEALKKAVELAKKNNDDEVAREIEEIVEALRENNSEMAKVMLALAKAVLLAAKNVAREIARAAENN--SDEMAKVMLALAKAVLLAAKNNDDEVAREIARAAAEIVEALREMLELAKRVLDAAKNNDDETAREIARQAAEEVEAD---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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