>PF05073 (193 residues) FQYDNESIEVVIIENGDDDRDGYVELTSAVNLLAPLVTIRGFNKAVLWTNVLPFHKLTKN NKNYVHVFALCKYLSMYNLSNDRHPPQFFVLKRLISDLIIGAQSQVIDPINDIKTQLCSL QECITNNSNGAIMQNMQQVYQPTTTNIGNAGDWTESLREILRHENASFFTNISSALENIK SLQLDLTNKLAFS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FQYDNESIEVVIIENGDDDRDGYVELTSAVNLLAPLVTIRGFNKAVLWTNVLPFHKLTKNNKNYVHVFALCKYLSMYNLSNDRHPPQFFVLKRLISDLIIGAQSQVIDPINDIKTQLCSLQECITNNSNGAIMQNMQQVYQPTTTNIGNAGDWTESLREILRHENASFFTNISSALENIKSLQLDLTNKLAFS | |||||||||||||||||||
1 | 1u0nA | 0.09 | 0.06 | 0.69 | 0.61 | DisCoVER | --I----SEPP-L-H---FYCSRLLD-LV--FLLDGSSRLSEEFEVLKAFVDMMERL-RISQKWVRVAVVE--YH-DGS-------------HAYIGLKDRRPSELRSQVYAGSQVASTSEVLKYTLFQIFASRIALLLMASISVDLEQRDEIVSYLCDLAP-EA---------------------------- | |||||||||||||
2 | 1itkB1 | 0.04 | 0.03 | 0.79 | 0.83 | DEthreader | LEAKSDLEELMSSQD---WWPADYGPLFIRMAWHSAGTYGPINSWPDNANLD------------K--AR-RLL--L--KQ-YGQKISWDLMILAGNVAIESMGFKTFG-YA--GGR-E--DA-FE-EDKAVNW---------MGLVNPEVHGIEGPWTQSPTEWDMPFGMFAKAWYKLTHRDMGP-PERFLGP | |||||||||||||
3 | 3hxxA | 0.07 | 0.07 | 0.99 | 0.85 | CEthreader | NKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNPSVDTGMGLERIAAVLQHVNSNDIDLFRTLIQAVAKVTGATDLSNK-SLRVIADHIRSCAFLIADGVMPSNENRGYVLAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFART | |||||||||||||
4 | 4it1A | 0.06 | 0.06 | 0.92 | 0.58 | EigenThreader | ---QSMKSIIEIESDN--GYIGLGESYRIVQTTVAAELAPGSHASKAVSNAYSAFEVAF----LDLQARYLNQAARMIEAYGFKSKALKKAFSIRMAELLGPTPGLEGMAELHKRTGDEFRRSVAQNSVCDTFGLGVSMHSNSHL------GISLMAMAHVAAAVQLGKLHDQYLTCGIRQRDDVRQMQRYKP | |||||||||||||
5 | 5lsjB | 0.13 | 0.08 | 0.63 | 0.29 | HHpred | ---------------------------------------------------------------LVAAGSYQRFTDCYKCFYQLQPAMTQIYDKFIAQLQTSIREE-ISDIKNLEAVLNALDKIVEEGKVRK-----EPAWRPSGIPFLQQRDTLRRHVQKQEAENQQLADAVLAGRRQVEELQLQVQAQQQ-- | |||||||||||||
6 | 6ezvX | 0.13 | 0.09 | 0.73 | 0.43 | MRFsearch | ----------------------TVKPDWFDDLSKKLDSAKLV--AKQWIDDL----------FQASIDAIHELYKADPTASGKDNTTVQQASQIMTALSSQV-SGIEATVKGMNKELSDWGVKMQAAHDDL----------------VNGATNIQKTIIDLQTDIESMNNAIDNNRAAIEKLNKDLVYAQVA- | |||||||||||||
7 | 5ady61 | 0.15 | 0.13 | 0.89 | 0.62 | FFAS-3D | FDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSA--------GVEALQVITGSRKAPHPKYFVKAVEIAEAVKATGASHALSPAQERNLERLILDIFA---QRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL---ETDRRLLRNRIVQIQSRLERVEKQREQGRQS-------- | |||||||||||||
8 | 5cwfA | 0.12 | 0.10 | 0.86 | 0.65 | SPARKS-K | KKVMEALKKAVELAKKNNDDEVAREIERAAKEIVEALRENNSDEMVMLALAKAVLLAAKNNDDREIARAAAEIVEALRENNSD--EMAKVMLALAKAVLLAAKNNDDEVAREIARAAAEIVEALREN---------------------NSDEMAKKMLELAKRVLDAAKNDDETAREIARQAAEEVEAD---- | |||||||||||||
9 | 2iubA | 0.08 | 0.07 | 0.89 | 0.71 | CNFpred | ------FIVLKMFTYDKLHELESEQVSLILNCVLMFQEKIGDVFDPVRERIRNRGIIRKKRADYLLYSLIDALVDDYF-------VLLEKIDDEIDVLEEEPEKETVQRTHQLKRNLVELRKTIWPLREVLSSLY--------RDVPPLIEKETVPYFRDVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNK | |||||||||||||
10 | 3vuoA | 0.07 | 0.07 | 0.94 | 1.00 | DEthreader | NSPVDNKNVVIVRARK-TNTFFKAFKVWVLQAIITLLKRINNT--KLLSLISTYASNICYKKTMAEI-LF--QP-LLTYKYFYID-PAMELTKCLIKSLYFIKIDLSDFSNALKHFYR-ISKPEKVN-KTEEVITALPVNLALASISRVDNFLNKASICVFVEIYPKFISYMEKYINNINIKTREFIQRCT-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |