Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | RGIDCSLNRLPCVTDQQCRDNCVISSAANELTCQDGFCNASDALVNAQVPDLIECDPRLGLVHVFSAGGDFVVSQTCVSTYRDLVDDTGTPRPYLCNDGRLIMNLNTVQFSPDACECSSGYEKMLFRQTALARTIPVCIPNRMANLYR |
1 | 1gpzA | 0.03 | 0.03 | 0.94 | 0.67 | DisCoVER | | GGQKAK-MGNFPW-Q--VF--TN-IHGRGGGALLGDRILTAAHTLYPKEASLDVFLGHTIRRVSVHYYNFEGDIALLELLPIYVSGFGLRFVRLPVSQNMFCAGLKQDACQGDSGVFAVATGIVSWGIGCSR-GYGFYTKVLNVDWI- |
2 | 5hweA | 0.07 | 0.06 | 0.88 | 0.83 | DEthreader | | -----HMPEAIEVRKVL--VIAVREVAEVPIFATVLTVGVAM--SEQKAAKDAMIDPADVHYVQTKTMDSNSAQIVVVGNIG-HSVMK-DDGIAILVNV-FLKCEAWHRKSVGGTAAVTGDPVFVSAAH--QGGPVAAI---VDLG-Q |
3 | 6azzA | 0.11 | 0.09 | 0.89 | 0.66 | CEthreader | | VDTVCKRGFLIQMSGHL---ECKCEN--DLVLVNEETCEEKVLKCDEKTVNK---PCGDFSKCIKIDGNPVSYACKCNLGYDMVNNIPNECKQVTCGNGKCILDTSNPVKTGV-CSCNIGKVPNV-------QDQNKCSKDGETKCSL |
4 | 4c16A | 0.09 | 0.07 | 0.84 | 0.65 | EigenThreader | | ACTNTSCSGH-----------GECVINNYTCKCDPGFSGLKCEQIVNCTALESPEH---GSLVCSHPLGNFSYNCSISCDRGYSSMEPIPACVECPANGFVECFQNPGWNTTCTFDCEEGFQSLQCTS----SGNWDPTCKA------ |
5 | 1m2sA | 0.19 | 0.05 | 0.24 | 0.26 | HHpred | | -----GLIDVKCFASSECWTACKKVTGSGQGKCQNNQCRCY----------------------------------------------------------------------------------------------------------- |
6 | 5u8qA | 0.18 | 0.11 | 0.66 | 0.47 | MRFsearch | | ---------WRCVDRDFCANIL------EGFVIHDGECMQE---------------CPSGFIRNGS---QSMYCIPCEGP-----------CPKVCEEKTKTIDSVTSAQMLQGCTIFKGNLLINIRRG-------NNIASELENFMG |
7 | 2hevR | 0.16 | 0.14 | 0.85 | 0.31 | FFAS-3D | | --LHCVGDTYECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVS--SKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHF------SPGDNQACKCTLAGKHTLQPASNSSDA--IC---------- |
8 | 2nyzA2 | 0.11 | 0.10 | 0.93 | 0.69 | SPARKS-K | | ----SLSARSPCKNSARYSDGCTGMEKMSLQQAKMNTCPCYYKYSVSPLPA-----MDHLILADLAGLDSLTSPVYVMAAYFDSTHENRPSSKL--YHCALQMTSHDGVWTSEQCPISQNVLQVRVAPTSMPNLVGVSLMLEGQQYRL |
9 | 6b7nA | 0.14 | 0.08 | 0.57 | 0.90 | CNFpred | | ---------------QQKINECVKS-----QSSRYGFCGNG-----------------THIFSLTQTAP-NGIFFMHAVLVPNKFTRV-NASAGICVDNTRGYSLQP-----QLILYQFNSWRVTPRN-------------------- |
10 | 6raoD | 0.07 | 0.05 | 0.81 | 0.83 | DEthreader | | -----AMSVSASATA-VP--LF-VA-RFTPTRIGS-WLDYTSNVPSDPTPDYRTVYALFLLADPNVEVP-PLSLPPSAAVYGKTDGERGVWKAPAN-KGINVIRHFGLVVW--GSRTKDWRYIP-------------VRRLFDAAERD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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