>PF04991 (224 residues) CRENDLTCYFCGGGCIGAIRHKGFIPWDDDLDFFMPRKDYEVFVKKWKDYEPGKRYILSD TTLDYVDRNNFATLRDSETTQIKPYQKDLRIPHGVALDVIPLDGYPDGKWKRKFQCMWAL IYQLFRAQTVPEKHGGLMAVGSRFLLSVFRGKKIRYKIWNVAKRHMTQYPISECNYITEL CSGPFYMKKKYKKEWFEKAVFVPFEGENMPIPVGYDGYLKEAFG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | CRENDLTCYFCGGGCIGAIRHKGFIPWDDDLDFFMPRKDYEVFVKKWKDYEPGKRYILSDTTLDYVDRNNFATLRDSETTQIKPYQKDLRIPHGVALDVIPLDGYPDGKWKRKFQCMWALIYQLFRAQTVPEKHGGLMAVGSRFLLSVFRGKKIRYKIWNVAKRHMTQYPISECNYITELCSGPFYMKKKYKKEWFEKAVFVPFEGENMPIPVGYDGYLKEAFG | |||||||||||||||||||
1 | 6kakA2 | 0.21 | 0.12 | 0.59 | 0.83 | DEthreader | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAVVDERGFVWEKA-----VEGDFFRVQYSESN-------------HLHVDLWPFYPR--------------------------------------------------------------------NGVMTKTWD------VEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
2 | 6kakA2 | 0.22 | 0.13 | 0.59 | 0.83 | DEthreader | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCLRGAE-VVDERGFVWEKA-----VEGDFFRVQYSESN------------H-LHVDLWPFYPR--------------------------------------------------------------------NGVMTKDTW-----DVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
3 | 6kakA2 | 0.18 | 0.11 | 0.59 | 2.42 | HHpred | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAGERGFVWEKA-------------VE-GDF-FRVQ---YSESNHLHVDLWPFYPRNGV---------------------------------------MT-----------------------KD-----------TWDVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
4 | 6kakA2 | 0.20 | 0.12 | 0.59 | 1.75 | DisCoVER | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNQLRGAEAGSVVDGFVWEKA-----VEGDFFRVQYSE-------------SNHLHVDLWPFYP--------------------------------------------------------------------RNGVMTKDTWD-----VEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKF- | |||||||||||||
5 | 6kakA2 | 0.18 | 0.11 | 0.61 | 1.50 | MRFsearch | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEA---GSVVDE------RGFVWEKAVEGDFFRVQYSE-----SNHLHVDLWPFYPRN--------------------------------------------------------------------GVMTK-----DTWDVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
6 | 6kakA2 | 0.20 | 0.12 | 0.59 | 1.38 | SPARKS-K | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCLRGAEAVVDERGFVWEKAVEGD-----FFRVQYSE-------------SNHLHVDLWPFYPRNG-----------------------------------------------------------------------VMTKDTW--DVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
7 | 6kakA2 | 0.21 | 0.12 | 0.59 | 1.03 | MAPalign | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCLRGAEAVVDERGFVWEKA-----VEGDFFRVQYSE-------------SNHLHVDLWPFYPR--------------------------------------------------------------------NGVMTK-----DTWDVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
8 | 6kakA2 | 0.19 | 0.12 | 0.61 | 1.13 | CEthreader | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAGSVVDERGFVWEKAVEGDFFRVQYS--------------ESNHLHVDLWPFYPRN------------------------------------------------GVMTKDTWDVEFP-------------------------EHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
9 | 6kakA2 | 0.18 | 0.11 | 0.61 | 1.04 | MUSTER | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAGS-------VVDERGF--VWEKAVEGDFFRVQ-----YSESNHLHVDLWPFYPRNG-----------------------------------------------------------------------VMT--KDTWDVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
10 | 6kakA2 | 0.18 | 0.11 | 0.61 | 4.88 | HHsearch | LEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAG--SV-V----DERGFV--WEKAVE-GDF-FRV---QYSESNHLHVDLWPFYPRNGVM-----------------------------------------------------------T---KD-------T---W-DVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |