Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | HTTYMYKRQNHFKTWLKRTQGKETTTVDKEVVDSVRLELKKQRIDDIKTISHTKVREILKKLRLNKHYNNCVQITAMITGITPPQMTSEQETALLQMFDAIQTPFQKIIQSEPRQNMLSYSFLIHKFLELMSWDEYLPYFPLLRSVDKIQYQDWIWRKLCAEVGFEY |
1 | 2w4mA | 0.06 | 0.05 | 0.94 | 0.84 | DisCoVER | | -SRVRAVFF-DLDNTL--IDASGEVILYKEEAEIICDKVQVKCFTCITDLRTSHWEEAIQET-KAANRKLAEECYFLWKSTRLHMTLAEDVLLLTKPAPSIFYYCCNLLVQPGDCVMVGDTLTDIQGGLNAGL--KA--TVWINPLKSSPVPHYMVSSVLELPALL- |
2 | 4bb9A | 0.06 | 0.05 | 0.83 | 0.83 | DEthreader | | SN---LDAAIVRLLGQCD-AEIFQRLYILTTMVQVAGKVQEVLKE-----LMSFYTYVIGPVLVGFGGSATKILETLLACITFRAVTYSQSPKIATLMKSVSTSLETTGH-------V---YL--V--G----WQTLGIIAIMVGLPQFTF-FIL-LDTVTNHIQLF |
3 | 1k94A | 0.11 | 0.09 | 0.78 | 0.49 | CEthreader | | ---------------------------------SVYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQ--DGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFDDYVACCVKLRALT |
4 | 6ep3A | 0.08 | 0.07 | 0.84 | 0.65 | EigenThreader | | ---NKFKT------------------LDKMVYNLLLEKIKNGELVPNEHLAEEKLAREFG-----VSRSPLRKAIATLTAQGIVDAAIAKAAHFGEKLYARMQEMERFSYLTDLENYFDAHHRFILCLISFAENYQVRIVKQIFFQMVHFSINMFKSTNKKSNQIYE |
5 | 4i2yA2 | 0.08 | 0.07 | 0.87 | 0.28 | HHpred | | -SRRKWNKAGHAVRAIGRLSSPVVDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTFDFPEFLTMMASEEEIREAFRVF--DKDGNGYIGAAELR-HVMTDLGEKL---------TDE-------EVDEMIRVADID- |
6 | 3siaA | 0.10 | 0.09 | 0.89 | 0.45 | MRFsearch | | --------PSVRNTWWFPLLN----TIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMELAYNLFVMNA--RARSGTLEPH-EILPALQQLGSLLLHRLFADLNCWIAICAFAAQTRSAYQMIF--- |
7 | 5hb1A2 | 0.09 | 0.08 | 0.95 | 0.72 | FFAS-3D | | ----SPDDVVTFKEQLQRSEQAHNSPVLRALLAESLRLFEQ----VAGSLTPANLTTAVEQYISLKYYAGAIQLCLTVDGKPANDSRKKAFDERKICYNLIHQVLDKLESDFLAATKRMFHFDLYEWYIEKGWTDRILSIDSPHVITYLQRLAETDFRHAELL-CRF |
8 | 5cwjA | 0.13 | 0.11 | 0.84 | 0.72 | SPARKS-K | | ---DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKK--SQDSEVLEIRVILRIAKESGSEEALRQAIRAVAEIAKE-----AQDS-EVLEEAIRVILRIAKESG---SEEALRQAIRAVAEIAKEAQDP------------RVLEEAIRVIRQIAEESGSEE |
9 | 3m1iC | 0.09 | 0.07 | 0.83 | 0.58 | CNFpred | | --------YKSEREVLVYLTH----LNVIDTEEIMISKLARQI--DGSEWSWHNINTLSWAIG-DTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKA----HWNFLRTVILKLFEFMHET----------HEGVQDMACDTFIKIVQKCKYHF |
10 | 3knzA | 0.08 | 0.07 | 0.84 | 0.83 | DEthreader | | ----NLY-FQGNET-PLR-LLELTQTRE-DLWRAAQALTEGVTR-WCALPVDVLVVGTASADYILTVPTLNLLLALAVALRLLRETFN-HLPALVTASQAWAQTNALALRDSAD--IRL--T--GP----------ATLFGTQGYFAF-ALILSIYRIENNGLNLNF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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