Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | PSPETLKTNWLETLKSEVSLQSKETEKEWSTTGCTIIVETWTDNKSKAIINFLISSPSSTFFHKSVDASSYFKNTKFLADLFDSVIQEFGPENIVQIILDNTLNCTSIVNHILQKYGTIFVSPCASQCLNAILKEFSKLDWVNRCILQAQTI |
1 | 2bw3A | 0.12 | 0.11 | 0.89 | 1.17 | DEthreader | | NEELLPSITLSRKVTSDAKEKKALIGREIKSAGASATIDLWTDNYKRNFLGVTLHYHLRDLILGLKSLDFERSTAENIYKKLKAIFSQFVEDLSIKFVTDRGANVVKSLA--N-----NIRINCSSHLLSVILKVKICSPD--D-------- |
2 | 6p5aA | 0.09 | 0.07 | 0.83 | 1.00 | DEthreader | | -----------------IDLMDSD--GVDDADLCVLAFDEMKVAAPSYVQLAIVRGKKSWKQPVFFDFN--TR-M--DPDTLNNILRKLHRYLVVAIVSDLGTGNQKLWTELWFSHLKIFVFSDTPHLIKLVRNHYGLTINKLNTETADF-- |
3 | 2bw3A | 0.17 | 0.16 | 0.94 | 1.68 | HHpred | | PSPITLSRK-VTSDAKEKKALIGREIKSAEKDGASATIDLWTDNIKRNFLGVTLHYHENDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDSIKFVTDRGANVVKSLA-------NNIRINCSSHLLSNVLENSFETPELN-PILACKNI |
4 | 6qbtA | 0.10 | 0.07 | 0.75 | 0.68 | DisCoVER | | ------------------------R--GLL-PNHIWQGDVTHYKYKYCLHVWVDTFSG---AVSVSCKK--KETSCETISAFLQAISLL--GKPLHINTDNGPAFQEFQEFCT--SYHIKHSTHLVERTNGIIKNLNVMNPSGKTRWQIH-- |
5 | 2bw3A2 | 0.14 | 0.14 | 0.95 | 1.32 | MRFsearch | | PSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYKRNFLGVTLHYHERDLILGLKSLDFERSTAENIYKKLKAIFSQFNVESSIKFVTDRGANVVKSLAN-------NIRINCSSHLLSNVLENSFESPSLCFVVPSILKV |
6 | 2bw3A | 0.14 | 0.14 | 0.95 | 1.14 | SPARKS-K | | PSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYIRNFLGVTLHYHENNLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLIKFVTDRGANVVKSL-------ANNIRINCSSHLLSNVLENSFEELACKNIVKYFKKA |
7 | 2bw3A | 0.15 | 0.14 | 0.93 | 0.89 | MAPalign | | PSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYIRNFLGVTLHYHLRDLILGLKSLDFERSTAENIYKKLKAIFSQFDLSSI-KFVTDRGANVVKS---L----ANNIRINCSSHLLSNVLENSFPILACKNIVKYFK-- |
8 | 2bw3A | 0.16 | 0.15 | 0.95 | 0.97 | CEthreader | | PSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYIRNFLGVTLHYHERDLILGLKSLDFERSTAENIYKKLKAIFSQFNVLSSIKFVTDRGANVVKSL-------ANNIRINCSSHLLSNVLENSFEETPELNPILACKNI |
9 | 2bw3A | 0.17 | 0.16 | 0.95 | 1.14 | MUSTER | | PSPITLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNIKRNFLGVTLHYHENDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLIKFVTDRGANVVKSLA-------NNIRINCSSHLLSNVLENSFEETPELNPILACKNI |
10 | 2bw3A | 0.17 | 0.16 | 0.94 | 3.22 | HHsearch | | PSPITLSRK-VTSDAKEKKALIGREIKSVEKDGASATIDLWTDNIKRNFLGVTLHYHENDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDSIKFVTDRGANVVKSL-------ANNIRINCSSHLLSNVLENSFETPELN-PILACKNI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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