Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MADGEICRCQVTDPPLIRHEDYDCTARMVQKRIEIGPLGVLLNLNMLFHMSRVRHIDVYPYLNNIMSISVSLDVPVSSGVGVGRVRVLIFTTSRERVGIFHGWQVVPGCFLNAPCYSGVDVLSDEL |
1 | 3ecyA | 0.04 | 0.03 | 0.72 | 0.70 | DisCoVER | | RFAKNALEPVRGSAAGVDL--RSAYDVV------------VP--ARGKAIVKTDL--QV-QVPEGSYGRVAP-------RFIDVGAGVVDEDYR----GNLGVVLFNHGDRIAQFICERIF----- |
2 | 6damA | 0.12 | 0.10 | 0.79 | 0.83 | DEthreader | | -------MCCDTSTQGISGEFVGGPWSMSLYQM--------TP-HDEW-D--Y-D--GI-NEVAVHFFKVNWYSNGEDVN-TEGVCPGSKPVSYSYISGNHVCMYEPGAT--LSMFPAGLG-SVWS |
3 | 6jjsA | 0.10 | 0.09 | 0.87 | 0.57 | CEthreader | | -----------RPTPPNLEFLFSANLTKGPAYIYDQSDAQIKALQTLTGGIIAGPN------FDGTVIGGTALSTRGADGTIRADAHYLIQTSDGANILVTESAAIPYVAVNNVTAWGTPPNLNEI |
4 | 1mm5A | 0.06 | 0.06 | 0.90 | 0.60 | EigenThreader | | QPEHYDLYIPARFAYDKEKTDRYNE-----RPWGGGFGLSRWDENWHGLYAMAFKDSW----NKWEIAGYGWESTWRDENFHGLGFTAGVTAWNYIPLPVLLPLASVGY-GPVTFQ--MTYIPGTY |
5 | 1diqA | 0.14 | 0.10 | 0.73 | 0.28 | HHpred | | LANGDVYRTGMGGVPFKWGYGPTLDGMFT----Q-ANYGICTKMGFWLMPFEVIFEDIVEIVDPLRSVVIALWLTRAQYTGMGAWNYAALYGTQEQV----------------------------- |
6 | 2pffB | 0.29 | 0.06 | 0.22 | 0.62 | MRFsearch | | ----------------------------------------------------------------QFKATHILDFGPGGASGLGGVRVIVAGT---------------------------------- |
7 | 5t8sA2 | 0.13 | 0.07 | 0.53 | 0.30 | FFAS-3D | | ------------------------------SVSEGHPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPAI----------------------------- |
8 | 4oj5A3 | 0.19 | 0.17 | 0.92 | 0.55 | SPARKS-K | | LNAGESVITSNTELPMVVFEGPSLKANSSF-LIKAGGTLSLIGLGISTHMFRVSTVE---------KVNIHTNCSVNAGAAYVVLSNIEYRQLFYSVNKYIGAQTIAGIMVKTPVDGNVSLTYKII |
9 | 2obvA | 0.15 | 0.09 | 0.57 | 0.63 | CNFpred | | -----------------------MFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDGAVIPVRIHTIVISVQHN------------------------------- |
10 | 1a4eA | 0.05 | 0.04 | 0.87 | 0.83 | DEthreader | | ---------RNPHAHGS-G--AFGYFTKCL-TRFSVPRGFATKFNLDWVYNTVFFQMILFSRGTPNYMGYGHTYKWSNKGWHYVQVHIKTGIKNLTCPSWTVI-PTVPYQ--EASADVLRLSYAAH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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