>PF04917 (329 residues) DYIQTKGWQTEARLVSNWTSAARSYIGKNYTTLQGSSTTTTPAVITTTMLKNTGFLPSGF TETNSEGQRLQAYVVRNAQNPELLQAMVVSSGGTPYPVKALIQMAKDITTGLGGYIQDGK TATGALRSWSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHT AIDMGSNNLNNVGAVNAQTGNFSGNVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGW LITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLE RTAVAGASCSPNGLVGRDNTGAILSCQSG |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DYIQTKGWQTEARLVSNWTSAARSYIGKNYTTLQGSSTTTTPAVITTTMLKNTGFLPSGFTETNSEGQRLQAYVVRNAQNPELLQAMVVSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQTGNFSGNVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAILSCQSG | |||||||||||||||||||
1 | 3s0tA | 0.08 | 0.03 | 0.38 | 1.06 | DisCoVER | ------TVSELVTNTNTIRVAMKDAYQRDG---K--YPD--YQAIAVAQLVQLGKLTPDE-ARNGISDYIGIGGAITSSSTINKGFAMELNGLSQQ----CRSILGQVGDWEYVAVGTSNTTILRLAKILKTC-----TATVNSITLAS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
2 | 2p4eA | 0.07 | 0.05 | 0.76 | 0.83 | DEthreader | ----------------------LVEVY--------DH--REIEGRV-MVTD----F----ENVPEEDCDHGLAVSGDAGVAKGASMRSVLQGKGAGGFDDALYSPASAPEVITVGAPVTLGTNFRCVLFAPGEDIIGVSQSGTSQAAVAAAMMLSAEELRQRLIH-------F-SAKDVINEAFQRVLTP------QLFCRTVWSAHSMATAIARCAPDEELLSCSSMEAQGKLVCRAHNA---NCSVHTAPPAGTRVHCHQQHVLQCVGHASIHA-CCHAGLECK----V-----KE----------HGIPVTVACEEGWTNTCVVRS | |||||||||||||
3 | 1q5fA | 0.10 | 0.05 | 0.46 | 0.75 | CEthreader | -MWGKKDAGTELTNYQTLATNTIGMMKGVDGSGAKMTDTLIQAGAAKGMTVSGDPASGSATLWNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSISTGMSRSGGTSGIKINGNNHAKVTAEIASSECTADNGRTGTNTLVFNYNG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 3ei2A3 | 0.09 | 0.07 | 0.75 | 0.67 | EigenThreader | DS----------------------------------NEQGSYFTNLG------PLERQGQGAFKEGYESPRKICYQEV--SQCFGVLSSRIE-VQDTS-------------GGTTALRPSASTQALSSSVSS-----SKLFEEVEVHNLLIIDQHTFELQNEYALSLDPNTYFIVGT---AMVYPEEAEPKQGAVEFN-GKLLA-SIN--STVRLYEWTTEKELRTECNHYNNALYLDFILVGDLMRSFN----------PNWMSAVEILDDDNFL--GAENAFCQKDSAAEVG--LFHLGECHGSLVMQPTQGSVLFNGMIGLVTSLS | |||||||||||||
5 | 3s0tA | 0.11 | 0.05 | 0.43 | 0.36 | HHpred | ---DSRTVSELVTNTNTIRVAMKDAYQRKYPDYQAPLSLTADSGIAVAQLVQLGKLTPD-EARNGISGDYGIGGAITSSGSTINKGFAMEL--NGLSQEQCRSILGQV-GDNWEYVAVGTSPSGSYDALSAGAVNMLATDNTTILRSLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 1zwtA | 0.18 | 0.07 | 0.39 | 0.63 | MRFsearch | --SDSNKSQNAISEVMSATSAINGLYIG----------QTSYSGLDSTILLNTSAIPDNYKITNPFGGELNVGPANN----NTAFGYYLTLTR--LDKAACVSLATLNLGSAKGYGVNISGENN---ITSFGNSADQAAKSTNKVTYFMK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4ixjA2 | 0.13 | 0.02 | 0.19 | 0.43 | FFAS-3D | --IEKSKAVTCLSNRENIKTQIVIAMAEE------SSKDKNEVIKEVLENKDGKYFET--EPKCKSGGIYSAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 5n8pA | 0.13 | 0.12 | 0.92 | 0.71 | SPARKS-K | TMNVTSGAAITLNTSSGVTGLTALNTNTSGAAQTVTAGAGQNLTATTAAQAANNDGGANVTVASTGVTSGTTTVGANSAASGTVSVSVANSSTTTTG---------AIAVTGGTAVTVNTTLTQADVTVTGNTQTAAATAGNGAVTITDSAAASATTAGKIATVTLGS--------FGAATIDSSALTTVNLSGTGTSLGIGRGALTATPTANTLTLNVNGLTTTGAITDSEDDGFTTINIAGSTASSTIAS-----LVAADATTLNISGDARVTITSALTGITVTNSVGATLGAELATGLVFTGG---AGADSILLGATTKAIVMGAG | |||||||||||||
9 | 3s0tA | 0.09 | 0.03 | 0.34 | 0.65 | CNFpred | ---DSRTVSELVTNTNTIRVAMKDAYQ-APLSLTADSIKTDSTGIAVAQLVQLGKLTPD-EARNGISDYIGIGGAITSSGSTINKGFAMELNGL--SQEQCRSILGQVGDNWEYVAVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 3dx4A | 0.05 | 0.04 | 0.81 | 0.67 | DEthreader | QKSIVKGLEFVTGPTASWAIPGHSPTMPIQRTHYSVKKELAQRQLEFL-WRQIW---GDTAL-------FTHMMPFY-------S-Y-----------------------DIPHTC---VCCFDFKRLCPLQWKKELYNVLAQGTLY-F-YADYWSGYYTSRYHKM--AKTHVVVDYEQRMQEALKACQMVMLDHNLREQ-----LLKSVPVHFQTIMRG-GAPEIRNVMRLETFYTD-F-KRRRLNYMFIED--ANTRLSLASGELLEKVNCRPHPAGYLTHKASQSLLDPLSELDVSVMRRLTQRVGYLLDVCTLTFLQLAAYVS-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |