>PF04902 (183 residues) GDRDEPSPKRIKTEEGCFDLQEALQAIHMRQETLKEQLAHARSKGEETVGRNIQVQLERL LAKQMEILHDAAAQERLQALEWRVPPGPYKHSTDRQNSNGISADKNADQQGERPLNLRVT SQRTRASDGDTPLGKQLANELKRHHHANAESKTSAATENGGDASSRALNLSEKKTIKSEP EDS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GDRDEPSPKRIKTEEGCFDLQEALQAIHMRQETLKEQLAHARSKGEETVGRNIQVQLERLLAKQMEILHDAAAQERLQALEWRVPPGPYKHSTDRQNSNGISADKNADQQGERPLNLRVTSQRTRASDGDTPLGKQLANELKRHHHANAESKTSAATENGGDASSRALNLSEKKTIKSEPEDS | |||||||||||||||||||
1 | 6djsA | 0.09 | 0.06 | 0.69 | 0.61 | DisCoVER | DAAEYGNIPVVNEHLGDLESAEPLE--VH--RH--K----------------------------------------ASLSRVKLGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGG-GGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGEQDSSYE---- | |||||||||||||
2 | 2frvJ | 0.11 | 0.09 | 0.81 | 0.83 | DEthreader | ---RAQH--QRGTVHANMGQYMHDHLVHFYHHALDWV--NVANALQVKLATAHYLEALRVQVKAARAMAIFGAQFTVGCPDEY-LNRYTPQGVDDFNEVGPSVLVYAKKHEPTQTAAEVWLDKLEANV------------APR-----STLGVEALEILRTVHSYDPCIACGVH--------- | |||||||||||||
3 | 5lbhA | 0.06 | 0.04 | 0.76 | 0.51 | CEthreader | --------------KVVELLKQIQADASVFYVKVHNFHWNVKGMDFHPTHKATQEIYEQFADVFDDVAERVLQLGEMLADMLKAAKIKEESKTSFCSKEIAQAVLADYEYFLKLFTELSAQADSQGDKVSAAYADDKVGELQKAIWMLKSQLA------------------------------ | |||||||||||||
4 | 4h8sA1 | 0.06 | 0.06 | 1.00 | 0.68 | EigenThreader | LLEEALQDSGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYELNLLHTELAKQLADTMLPIIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENRRKQHLSSLQYYCALNALQYRKQMAMMEPMIGFAHGQINFFKKGAEMFSKRMDSFLSSVADMVQSIQVELEAEAE | |||||||||||||
5 | 2lf0A | 0.15 | 0.08 | 0.52 | 0.37 | HHpred | -----------------EVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAE-IARLREVHSQKALMKMQRAITK-------KE--------------QADMKLKKSVRGLV--VVHPMTALGREM---------------------------------------------- | |||||||||||||
6 | 4rsiB | 0.09 | 0.04 | 0.51 | 0.38 | MRFsearch | --------------EEVDKIERELSERENNFRVASDTVHEMEEELKKLHEPDLESQISKAEMEADSLASETLAEQQVKEAEMAYV----------------------------------------KAVSDKAQLNVVMKNLERLRGE------------------------------------ | |||||||||||||
7 | 5fwlE1 | 0.16 | 0.07 | 0.44 | 0.67 | FFAS-3D | DDEDETHPNRWRHQERMEQFQKEKEELDRGCRECKRKVAECQRKGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKS------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6w2vA | 0.12 | 0.11 | 0.95 | 0.77 | SPARKS-K | ---------ATDKEEVIEIVKELAELAKQVAEVVRALTEVAKTSTDTELIREIIKVLLELASKEALQAVAELARELAEKTGDPIAKECAEAVSAAAEAVKKAADLLKRHPGSEACLLALDYPKSDIAKKCIKAASEAAEEASKAAEERHPDSQKARDEIKEASKAEEVKERCERAQE-HPNAG | |||||||||||||
9 | 1fioA | 0.06 | 0.04 | 0.63 | 0.50 | CNFpred | -----------------SQINRDLDKYDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQF--KLKNEIKSAQRDG-------IHDTNKQAQAE-----------------------------NSRQRFLKLIQDYRIV------------DSNYKEENKEQAKRQYMIIQPEAT | |||||||||||||
10 | 2v0oA | 0.08 | 0.07 | 0.79 | 0.83 | DEthreader | --GEKNSGFDVLY-HNMHGQISTKELADFVRERATIEEAYSRSMTNLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEATIQSIQALQKSKEYAATTYKLVEKYAKADFEKMTETAQKF-DI--EETHLIHIKEIIGSLSNAKE-HL------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |