Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | CPPRQDYRYWYFAAELTIGVNYDINSTIIGECHMSESYIDRNANIVLTGYGLEINMTIMDTDQRFVAAAEGVGKDNKLSVLLFTTQRLDKVHHNISVTITCMEMNCGTTKYDSDLPESIHKSSSCDITINGSCVTCVNLETDPTKINPHYLHPKDKYLYHNSEYSMRGSYGVTFIDELNQCLLDIKKLSYDICYRE |
1 | 3on9A | 0.13 | 0.10 | 0.76 | 1.13 | DisCoVER | | ------GSFNSIDVEINMYP-V-N----KTSCNSSI-----GSSSTISTSELTITLTHEDC-TPVFIGDYYSVVKLATSGFFTNDVHQDLTQCKINLEIKCNQLTPTTK--------VYLMPHSETVTVVCLSNLDVYI-VYA--N-TDAIYS-----------------DMDVVAYHTSYILNVDHIPPNDCER- |
2 | 2vgaA | 0.08 | 0.06 | 0.76 | 1.29 | MAPalign | | -------EYMGIEVYVEATLDEPL---RQTTCESKIHK----YGASVSNGGLNISVDLLNCFLNFHTVGVYTN-RDTVYAKFASNMVKLTEECIVDIYLKCEVNGNRLKPRDFKTVPPSNVGSMIELQSDYCVDVTTYVKIYDECGNIKQHS--------------------------------IPTLRDYFTTK- |
3 | 2vgaA | 0.08 | 0.07 | 0.87 | 1.20 | CEthreader | | -CDSDNKEYMGIEVYVEATLDEPLRQTT---CESKIHK----YGASVSNGGLNISVDLLNCFLNFHTVGVYTN-RDTVYAKFASLDPWTTEPCIVDIYLKCEVDKTKDFMKTNGNRLKPRNVGSMIELQSDYCVNDVTTYVKIYD-ECGNIKQHSIPTLRDYFTTKNGQPRKILKKKFDNC--------------- |
4 | 4hkjD | 0.09 | 0.07 | 0.74 | 0.83 | DEthreader | | -RCEKEEETWKLKIG-CIQAKFYS--KR--TDCSVHRPD--GGGLITEGNGYRVVVHDCNPFI-IATTKQTHFGVTHSYIEFSNSNTGAPEIDSKILISVYCSGLD---FH-T-LK-YV-ESNYLHITVKYTIHLGVNYSFNECERKLTSIYETDT---------------------------DIQTR-------- |
5 | 3rkoN | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | ---------------------------QNLLPLIVTVVHFATSVGLALLVMLGVLSTCAWLYKEFLVILGLLANHSLGIISPLLGYAFRQSGAAVSFTAIAFG----AAFSIIFGLMA-QNKRLLG-SHLLMVGVYLYSSAFV-DSLFSYLLAAVMMMLSIPMT-LYLAV-ALVLVLGVPPLISIVRLAM------ |
6 | 3on9A | 0.16 | 0.12 | 0.77 | 0.43 | HHpred | | -------SFNSIDVEINM---YPVN---KTSCN-----SSIGSSSTISTSELTITLTHEDCTPVFIGDYYSVVD-KLATSGFFTNDKV--HQDKINLEIKCNSGRES-----RQLTPTYLMPHSETVTVVGDCLSNLDVYIVYANTDIYSDMDVVAYHTSYIL-N-------VDHIPPNDCERD------------ |
7 | 3on9A | 0.17 | 0.10 | 0.58 | 0.57 | MRFsearch | | ---------NSIDVEINMYPV------NKTSCNSSI-----GSSSTISTSELTITLTHEDCTPVFIGDYYSVV-DKLATSGFFTNDKVHQTQCKINLEIKCNSG---------RESRQLTMPHSETVTVVGDCLSNLDVYIVYA---------------------------------------------------- |
8 | 3on9A | 0.15 | 0.12 | 0.79 | 0.76 | SPARKS-K | | ------GSFNSIDVEINMYVN-------KTSCN-----SSIGSSSTISTSELTITLTHEDCTPVFIGDYYSVVD-KLATSGFFTNDKVLTTQCKINLEIKCNSGR-ESRQLTPT-TKVYLMPHSETVTVVGDCLSNLDVYIYANTDAIYSDMDVVAYHTSYI--------------------LNVDHIPPNDCERD |
9 | 3on9A | 0.14 | 0.10 | 0.72 | 1.18 | MAPalign | | -------SFNSIDVEINMYP---V---NKTSCNSSI-----GSSSTISTSELTITLTHEDCTPVFIGDYYSV-VDKLATSGFFTVHQDLTTQCKINLEIKCNSGRE--SRQLTPTTKVYLMPHSETVTVVGDCLSNLDVYIVYANTDAIYSD---------------------------------MDVVAYHTSYI |
10 | 3on9A | 0.09 | 0.08 | 0.82 | 0.92 | CEthreader | | --------GSFNSIDVEINMY----PVNKTSCNSSIG-----SSSTISTSELTITLTHEDCTPVFIGDYYSVVDKLATSGFFTNDKVHQDLTTQCKINLEIKCNSGRESRQLTPTTKVYLMPHSETVTVVGDCLSNLDVYIVYANTDAIYSDMDVVAYHTSYILNVDHIPPNDCERD------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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