Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DQSQNPTPLSRYESQKRRDWNTFGQYLKNQRPPVSLSQCNFSHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPENNPFGNGAIRVYLRE |
1 | 4bgdA2 | 0.08 | 0.07 | 0.83 | 0.83 | DEthreader | | -TTEIIS-TLSGLIASSFTIQSFVSSLS-----NTS--TL-KNMLYVLS-TA--VEFESV--PLRK----SSGSVSFKVFLDILEKVVPLINVVVDILSANGYL-NATTAM-DLAQMLIGV |
2 | 2zjaA | 0.05 | 0.05 | 0.91 | 1.00 | DEthreader | | EEISIRPGIRTAKLYIDPTAKMFKD-KM----EEVVKDPNPIGIFHLIS-LT--PDITPFN--YSKREFRLKYSVEPGDIYRIVETAEWLVYSLKEIAKVLGAYEIVDYLE-TLRVRVKGI |
3 | 1ouqA | 0.14 | 0.10 | 0.71 | 0.59 | HHpred | | ----RQAFSEHTWKMLLSVCRSWAAWCKLNN--RKWFPAEPEDVRDYLLYLQA--------------------------RGLAVKTIQQHLGQLNMLHRRSG---LPRPSDSNAVSLVMRR |
4 | 1baxA | 0.16 | 0.09 | 0.58 | 0.59 | DisCoVER | | --------------QHERYVEQLKQALKRGVKLLFFD-F----VKDTCP-------------------------------WFPEGTIDIRWRRVGDCFQGPEKVPVTAFSYWNLIKELID- |
5 | 1ouqA | 0.16 | 0.11 | 0.67 | 0.60 | MRFsearch | | ---------EHTWKMLLSVCRSWAAWCKLN--NRKWFPAEPEDVRDYLLYLQARG--------------------------LAVKTIQQHLGQLNMLHRRSGL---PRPSDSNAVSLVMRR |
6 | 1ouqA1 | 0.14 | 0.11 | 0.74 | 0.90 | SPARKS-K | | MFRDRQAFSEHTWKMLLSVCRSWAAWCKLNN--RKWFPAEPEDVRDYLLYLQARG--------------------------LAVKTIQQHLGQLNMLHRRSGLPR---PSDSNAVSLVMRR |
7 | 4ep7A | 0.12 | 0.12 | 0.94 | 0.66 | MAPalign | | ------KISDKEFKEKRAALDTLRLCLKRISPDAELLCVLMTIALQFYEELIAEGFEGPIIKLTSDTKNGFGASFQCDIGFNLDARLKPMVLLVKHWAKRKQINTLSSYGYVLMVLYYLI- |
8 | 1ouqA1 | 0.13 | 0.10 | 0.74 | 0.64 | CEthreader | | MFRDRQAFSEHTWKMLLSVCRSWAAWCKLNN--RKWFPAEPEDVRDYLLYLQARGLAV--------------------------KTIQQHLGQLNMLHRR---SGLPRPSDSNAVSLVMRR |
9 | 1ouqA1 | 0.16 | 0.12 | 0.74 | 0.62 | MUSTER | | PVDATSDEFSHTWKMLLSVCRSWAAWCKLNN--RKWFPAEPEDVRDYLLYLQARG--------------------------LAVKTIQQHLGQLNMLHRRSGLPR---PSDSNAVSLVMRR |
10 | 4acoA | 0.12 | 0.09 | 0.74 | 0.67 | HHsearch | | --------------QYKTYYTKYIQWCQLNQIIPTDLPISAELIHWFLLDTLITDDEDL----D----EEE-------ENSFKIATLKKIIGSLNFLSKLCKVHENPNANI---DTKYLES |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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