Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | MSNLLQMGTDFEKKLKERAVSTENMLNSEFRKLEASVDRELNLNGQKIRDAI |
1 | 7jg5b | 0.04 | 0.04 | 1.00 | 1.67 | DEthreader | | EAAQADYEKEMAEARAQASALRDEARAAGRSVVDEKRAQASGEVAQTLTQAD |
2 | 4nqjA | 0.21 | 0.21 | 1.00 | 1.67 | DEthreader | | KLHLQQHVSMEFLKLHQFLHSKEKDILTELREEGKALNEEMELNLSQLQEQC |
3 | 5u1dB | 0.04 | 0.04 | 1.00 | 1.50 | DEthreader | | DPHAFASAIFFMCLFSFGSSLSAGCRGGCFTYTMSRINLRIREQLFSSLLRQ |
4 | 4ke2A | 0.10 | 0.10 | 1.00 | 1.67 | DEthreader | | RAAAAASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAA |
5 | 4ke2A | 0.10 | 0.10 | 1.00 | 1.67 | DEthreader | | AAAAAASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAA |
6 | 2j69A1 | 0.12 | 0.12 | 0.92 | 0.31 | HHpred | | ---KKELVKHLPQVAHEQSQVVYNAVKECFDSYEREVSKRINDDIVSRKSE- |
7 | 3h7xA | 0.00 | 0.00 | 0.02 | 0.74 | DisCoVER | | S--------------------------------------------------- |
8 | 1f5nA | 0.14 | 0.13 | 0.96 | 0.42 | MRFsearch | | --HLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEI |
9 | 2ra1A4 | 0.12 | 0.12 | 1.00 | 0.77 | SPARKS-K | | DITVAMKAREAQDAVKDKAKAALDQVNQYVSKVKAELQKAAQDAKAAYEAAL |
10 | 3m9uA | 0.08 | 0.08 | 1.00 | 0.55 | MAPalign | | APEAQWPAYLQFADAFGLAFQIYDDILDYPGKLGLIGANQALIDTIHSGQAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|