>PF04827 (204 residues) EYLRKPNSNDVRRLLEMGEARGFPGMMGSIDCMHWQWKNCPKAWKGMFMSGHKGVPTLLL EAVASSDLWIWHAFFGVAGSNNDINVLDRSPLFDEVLEGRAPEISYTLNGNNYNFGYYLA DGIYPEWATFDKTIPRPQGEKRKLFSKYQEGQRKDVERAFGVLQSRFAIVRGPARFWDKG DLARIMRACIILHNMIVEDERDTY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | EYLRKPNSNDVRRLLEMGEARGFPGMMGSIDCMHWQWKNCPKAWKGMFMSGHKGVPTLLLEAVASSDLWIWHAFFGVAGSNNDINVLDRSPLFDEVLEGRAPEISYTLNGNNYNFGYYLADGIYPEWATFDKTIPRPQGEKRKLFSKYQEGQRKDVERAFGVLQSRFAIVRGPARFWDKGDLARIMRACIILHNMIVEDERDTY | |||||||||||||||||||
1 | 1c0mC1 | 0.11 | 0.08 | 0.70 | 1.14 | DisCoVER | ------------NP--RG---LGPLQIWQTDFTLEPRM-A------PR---------SWLAVTVDTASSAI-VVTQHGR--VTSVAVQHH-WATAIAVLGRP-------------KAIKTDGCFTWLGIAHTTGIPGNS---------Q--GQAMVERANRLLKDRIRVLAEFMKRIPTSKQGELLAKAMYALNKTPIQKHWP- | |||||||||||||
2 | 3ecpA | 0.06 | 0.05 | 0.87 | 1.17 | DEthreader | VFGAMTVK-LAQEFP--E-------LLAIEDTTSLSYRHQVAEE--LGKLGSQDSRGWWVHSVLLLRTVGLLHQEWWMRPAKESGKWL-A-AAATS---------RLRM-GSMSNVIAVCDREADIYLKFVLTSEPVESLAQALRVIDIYTHRWRIEEFHKAWKTGA-GAERQR-MEEPDNLERMVSILSFVAVRLLQLRSFLW | |||||||||||||
3 | 1c0mC | 0.08 | 0.06 | 0.76 | 1.26 | CEthreader | ---------------GVNPRGLGPLQIWQTDFTLEPRMAP----------------RSWLAVTVDTASSAIVVTQHGRVTSVAVQHHWA-TAIAVLG----------------RPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRVLAEFMKRIPTSKQGELLAKAMYALNHKERGENTKT | |||||||||||||
4 | 3ecpA1 | 0.07 | 0.06 | 0.84 | 1.15 | EigenThreader | VSAEAIRKAGAMQTVKLAQ---EFPELLAIEDTTSLSYRHQVAEELGKLGSIQDKSRGWVHSVLLTFRTLLHQEWPADADEK------ESGKWLAAAATSRLRMG-------SMMSNVIAV---------------VESLAQALRVIDIYTHRWRIEEFHKAWKTGA--GAERQRMEEPDNLERMVSILSFVAVRLLQLRESFT | |||||||||||||
5 | 3ecpA | 0.06 | 0.05 | 0.87 | 1.17 | DEthreader | SVGQTVKAQEFP--E----------LLAIEDTTSLSYRHQV--AEELGKLGSIDSRGWWVHSVLLLRTVGLLHQEWWMRPAKESGKWL-A-AAATSRL-RMGSMM--------SNVIAVCDREAIHYDKRFVVRSPLYKLRLAWLLIDIYTHRWRIEEFHKAWKTGAGAE-R-QRMEEPDNLERMVSILSFVAVRLLQLRESFT | |||||||||||||
6 | 6x67C | 0.05 | 0.04 | 0.80 | 1.00 | DEthreader | LFQCIQN-YTP--GA----------H-LTIDEQLLGFR-GR--C-PFRMYIPNSKYGIKILMMCDGTKYMINGMPYLGR-T---PLGEYY-VKELS---------KPVR--GS-CRNITCDNWF-TSILIVLSSCEDASINKPQMVMYYNQTKGGVDTLDQMCSVM-TCS-RK-TNRWP-MALLYGMINIACINSFIIYSVSRK | |||||||||||||
7 | 1c0mC1 | 0.08 | 0.06 | 0.76 | 1.26 | CEthreader | ---------------GVNPRGLGPLQIWQTDFTLEPRMAP----------------RSWLAVTVDTASSAIVVTQHGRVTSVAVQHHWA-TAIAVLG----------------RPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRVLAEFMKRIPTSKQGELLAKAMYALNHKERGENTKT | |||||||||||||
8 | 6x67C | 0.05 | 0.04 | 0.80 | 1.00 | DEthreader | LFCIQNY--TP--GA----------H-LTIDEQLLGFR-GR--C-PFRMYIPNSKYGIKILMMCDSTKYMINGMPYLGR-T--PLGEY-Y-VKELSK--PVRGS----------CRNITCDNWFTSLNLTIVGTVVSYSINKPQMVMYYNQTKGGVDTLDQMCSVMTCS--R-K-TNRWPMALLYGMINIACINSFIIYSHVKV | |||||||||||||
9 | 3ecpA1 | 0.06 | 0.05 | 0.78 | 1.00 | DEthreader | VFGAMTVKLAQEF-P--E-------LLAIEDTTSLSYRHQVAEE--LGKLGSQDSRGWWVHSVLLLRTVGLLHQEWWMRPAKESGKWL-A-AAATS---------RLRM-GSMSNVIAV----------------VE-SLAQALRVIDIYTHRWRIEEFHKAWKTGA-GAER-QRMEEPDNLERMVSILSFVAVRLLQLRSFT- | |||||||||||||
10 | 3ecpA1 | 0.09 | 0.08 | 0.89 | 1.13 | CEthreader | PNVSAEAIRKAGAMQTVKLAQEFPELLAIEDTTSLSYRHQVAEELGKLGSIQDKSRGWWVHSVLLLFRTVGLLHQEWWMRPDDPADADEKESGKWLAAAATSRLRMG---SMMSNVIAVVE-----------------SLAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDLERMVSILSFVAVRLLQLRESFTP-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |