Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VPYGSRARMILLYLQTRALQTDSREVELGRSMHDWLDRMGLSVGGQTYRDIREQASRIAACNLTFAWEDANSLGFEKDSIVKGGIHFSSEHNSPQGTLWEDRVLLSEAFFRELKAHPVPIWEPALRHIQNNSTSIDIYIWLAYRLHSLNKSTTITWP |
1 | 2nraC | 0.09 | 0.08 | 0.89 | 1.00 | DEthreader | | QL-PLPAKRVMYMALALIDSEPLRRVFKI-RAEDLAALAKITPS-LAYRQLKEGGKLLGASKISLRGDD--IALALDLNIIEWIAYSP-------DEG-YLSLKFTRTIEPYISSKFTTQLLTASL-RLSSQYSSSLYQLIRKHYS----FIISELK |
2 | 5ubfA | 0.16 | 0.14 | 0.87 | 1.00 | DEthreader | | LATVD-DLT-LFALFTLTVQYHDNKTPLY--ITDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHETGRWGFKSDRFRFLARTITASEEAP---IKPNLYILVWEPSFFEELTRDYFLFPPEILKQ-HTLVFQLYSYFRSR--S----------KL |
3 | 2nraC | 0.10 | 0.10 | 0.92 | 1.00 | HHpred | | -QLPLPAKRVMYMALALIDSKEGRVFKI--RAEDLAALAKIT-PSLAYRQLKEGGKLLGASKISLRGDDIILNEELDLNIIEWIAYSPDE--------GYLSLKFTRTIEPYISSKFTTQLLTASLRLS-SQYSSSLYQLIRKHYSNFKKYFIISVD |
4 | 5ubfA1 | 0.17 | 0.13 | 0.78 | 0.99 | DisCoVER | | KNITVDD-LTLFALFTLTVQYHDNKTPLYI-T-DILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELNPEGFKSDRFRFLARTITASEEAPEIRIKPNLYILVWEPSFFEELLTRDFLFPPEILK------------------------------- |
5 | 2z9oA | 0.14 | 0.11 | 0.82 | 1.13 | MRFsearch | | ---SRDQKRMLYLFVDQIR---DGICEI--HVAKYAEIFGLT-SAEASKDIRQALKSFAGKEVVFYRPEGDEKGYESFPWFIKRAHSPS--------RGLYSVHINPYLIPFFIGRFTQFRLSETKEI-TNPYAMRLYESLCQYRK----------- |
6 | 5ubfA | 0.14 | 0.14 | 0.97 | 1.18 | SPARKS-K | | SKNITVDDLTLFALFTLTVQYHDNKTPLYI--TDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELTPEGFKSDRFRFLARTITASEEAPVEGIKPNLYILVWEPSFFEELLTRDFLFPPEI---LKQHTLVFQLYSYFRSRSRRHTDVLSELNQ |
7 | 5ubfA | 0.19 | 0.17 | 0.87 | 1.00 | MAPalign | | KNITVDDL-TLFALFTLTVQYHDNKTPLY--ITDILSLRGKKDSGPARDSIRDSIDRIEDFQLHEGRWLENPEGFKSDFFLARTITASGSDGEIRIKPNLYILVWEPSFFEELLTRDFLFPPEILK---QHTLVFQLYSYFRS-------------- |
8 | 2z9oA1 | 0.13 | 0.10 | 0.75 | 1.02 | CEthreader | | YSLSRDQKRMLYLFVDQI---RDGICEI--HVAKYAEIFGLTS-AEASKDIRQALKSFAGKEVVFYRDAGDEKGYESFPWFIKRAHSPSR--------GLYSVHINPYLIPFFIGLQNRFTQFRLSETKEI-------------------------- |
9 | 2z9oA | 0.13 | 0.11 | 0.90 | 0.80 | MUSTER | | YSLSRDQKRMLYLFVDQI----DGICEI--HVAKYAEIFGLT-SAEASKDIRQALKSFAGKEVVFYRPEEDAKGYESFPWFIKRAHSPSRGL--------YSVHINPYLIPFFIGLQTQFRLSETKEI-TNPYAMRLYESLCQYRKDGSGIVSLKID |
10 | 5ubfA | 0.16 | 0.14 | 0.89 | 0.67 | FFAS-3D | | ------DDLTLFALFTLTVQYHDNKTPL--YITDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELTGRKSDRFRFLARTITASEEAPVEGSDGEIRIKPLVWEPSFFEELLTRDFPPEI-----LKQHTLVFQLYSYF--RSRSRRHTDVLS-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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