Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | VGIYGWRKRCLYFFVLLLMVTMIVNLALTIWILKVMKFSVDGMGNLRITNQGVRLEGKSEFLLPLYVKEIQSRKDSPLMLQSDRNVTVNARNNLGQITGQLTVGSHAVEAQGRRFEIKTEDGKKVLFSADENEISIGVEKLRVTGPEGAVFEQSVETPHVRAQPSQELKLESPTRALTMEAPKGVHIAADEGEIKATCRRDLQLQSTDGEIFLNAKTIRLGNIPQGSASTSSTPHQTVYEVCVCPNGKLFLSPGEA |
1 | 3vgzA1 | 0.06 | 0.04 | 0.62 | 0.58 | DisCoVER | | -----------ELR--KA--V--GK--GA--YE-AYSQQENALWLATSQ-DKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNQTLWFGNTVN--SAVTAIDAK-VKGRLVLPRELVADDATNTVYISGI----GKESVIWVVDGNIKLKTAIQNTGHPNSLAL-----------------------------------------------------------------SADGKTLYVSVKQKSEAQPDDVIRI- |
2 | 3ldkA | 0.09 | 0.07 | 0.75 | 0.83 | DEthreader | | ----------------------------DPCAHVGFLHIAQVFDGT--H-S-TAFRAPFVFRSEWYVAVSGGVHGVGPAQFLYR-EWWQEATNSSWGRWFNVLFTGEVFAMAGFWAYAAAGKVVSFVWLTQYGSLLLPRELKVQVVVSWVRTLGITIKL-------SKFFVL--TAQFILASLERT---------A-----IYYQF--SNESL---VVDR-SQTSAAAP-TNPGLDSFTESGVYNGRFALSTWAR- |
3 | 6fptA2 | 0.10 | 0.10 | 1.00 | 0.49 | CEthreader | | YGGVGLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPHHKFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNFEGKILVSDTHRVQLFGPTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPRFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPGTHGNGFGQMDRPSGIAVTPDGVIVAVDFGN |
4 | 5oqlA | 0.05 | 0.05 | 0.87 | 0.63 | EigenThreader | | HRQGVV-----------------------------GAYFSKDQETIYTVSAVFEWKVNKHFRCAAYHALLVAGFEIDFVTINKSGEWLAFGASKLGQLLVWEWQSESYILKQQNSLVYSPDGQRIVTAADGVTACEFAKKFTASLDGSVRAWDLFTC-MAVDP--SGEVIAAG--SISSLAGSVLVSGSWDRTARIWSIFDVLDVARPDSAISTLDGGVDGRRDVSGGRRIVAGTKNFNTIRYSGTCLLAGGNSKY |
5 | 3jx8A | 0.16 | 0.11 | 0.67 | 0.35 | HHpred | | --------------------------------------------------DEITFVGSADF-------EYEQDKAPYLSVTIDEN--------L-FDYLVTEVEGGTLKI-------YPKSIKKYDLRPTVYKIKSELKELNTVGSGSFIISKP-----TKVNR--EIN--AGSGNVELRGGYKLECNAGSGNIIAKQLDNLSCSASSGEIEVIGTRIKAFDCQARKAE-CNIASSGEISVYATGSGEIHYKGD-- |
6 | 6sjlA | 0.14 | 0.11 | 0.75 | 0.60 | MRFsearch | | ---LDMDEAIRQLEQALSLARSMAKAATAANA------------GMLLHPDGIGMVSAR-----------------ALRIASGESVGIMSG-----DNTDITAGQSFTVVAEGAVSLLSRNQGMQLLAAKRVNIQAQSDDLSMSSQ-------------------QNLDIQSSEGKVTVSANQELILACGGAYIKLSG-GNIELGC-PGQILLKSTNGGGFILTDEAGVPQ---PSTPYRLTTA-EGDILQGI--- |
7 | 6mitC | 0.08 | 0.05 | 0.64 | 0.60 | FFAS-3D | | ------KTRRWVIILLSLVALILI------GVNLDPTYKSDHSDTVVYSPE-----GALNY--RLIAQHVEYFSDDGISWFT--QPVMTTFDKDKVPTWSIKLTNDRMLYLYGHVEVNALTA-------DSQLRKITTDNAQINLVTQDVTS------------QDLVTLYGTTFNSS---GLRMRGNLRSKNAELIEKVRTSYEIQN------------------------------------------------ |
8 | 3jx8A | 0.09 | 0.07 | 0.82 | 0.85 | SPARKS-K | | -----------------------DKRIDGNGNPETREIKISDYDEITFVGSAFEYEQSVTIDENLFDYLVTEVEGGTLKIYPKSINSYDLRPT--VYKIKSNSKEKELNTVGSG-SFIISKAGSGNVELR---GPVKGYKLECNAGSGNIIAKDIQLDSCSLASSGEIEVIGTVDRASFNVAGSGEIKAFDRKAECNIASEISVYATQIDANIVGSEIHYKGDPEISKSIGSGSINKVK----------------- |
9 | 3jx8A | 0.06 | 0.04 | 0.73 | 1.05 | CNFpred | | ---------------------------------DEITFVG--SADFEYEQ-YLSVTIDENLFDYLVTEVE----GGTLKIYPKSSYDLRPT----VYKIKSNSK------ELKELNTVG----SGSFIIS-KPTKVNRMEINMAGSGNVELRGPVKGYKLECNMSGNIIAKDQLDNLSCSLAGEIEVIGTVDRASFNVAGEIKAFDCARKAECNIGEISVYA-------------TQILDANIVGSGEIHYKGDPE |
10 | 4f91B | 0.05 | 0.04 | 0.77 | 0.83 | DEthreader | | LRAALETDCMEIKIIYIIVCTPEKWIIHYYSGRLMRAI---FEIVLNR-----GWALTTLNKMKPLRQF----------KIEKKNFPFERLYD-------------------------KYVHLFPKLELSVVLTITPSSEAFWILVESVI----YFL--ITFFVPI--NISHTQTRLLMAVAIIVFVPSR-KQLTAVAVIIMTQYYNGHAYVDYPYDVLMVG-AN-PLQDDE-G--RCVIMCQGS---KDFFKFLY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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