Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | AEIPPEDKDGVYYFIVTLFVFATFASTLMTGAFLAMSIMKFFWFLAQLTIAVFIMSSLNFLINVPATLFSLITKEFVKSDAFFLMSNVIDFCHNAVLFANLLISIHRFSVFFFVKITGKLFEKPLVYIWMILVWILSGAVVLCMMSKNCRYEYDMAVFEHYVLKCRTESGIAISPSSVIQMIEIAMQFVIPIFILAVYIALVAKICTIKQGTQNNYELTILKQAVFIFALFQISSIVFLLCQTLKFKVATAFLIKRVTNTTEIFAGAATPCFFFFTSKDIRKLVTVKVSATSSQNNS |
1 | 4zwjA | 0.12 | 0.11 | 0.95 | 1.33 | DEthreader | | FYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVHLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLH-G-Y-FVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCKPM-SNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEG-LQCSCGIDYYTL-KPEVN-NESFVIYMFVHFTIPMIIIFFCYGQLVFTVKEAAQQTTQKAEKEVTRMVIIYVIAFLICWVPYASVAYICFGPIFMTIPAFFAKSAAIYNPVIYIMMN--KQ--FRNCMLTTICCGKN---- |
2 | 5ztyA | 0.13 | 0.12 | 0.91 | 1.33 | DEthreader | | -----GPQKTAVAVLCTLLGLLSALENVAVLYLILSSRKPSYLFIGSLALADFLASVVFACSFVNFHVF--H--GVDSKAVFLLKIGSVTMTFTASVGSLLLAAIDRYLCLRYPPSYKALLTRGRALVLLGIMWVLSALVSYLPLM-GWTCC-RPCSELFPLIP-----------ND-YLLSWLLFIAFLFSGIIYTYGHVLWKAHQHVASWDARLDVELAKTLGLVLAVLLIWFPVLALMAHSTLSDQVKKAFAFCSMLC-LINSMVNPVIYALRSEEIRSSAHHCL-A-H-WKK- |
3 | 5zbhA | 0.11 | 0.11 | 0.95 | 2.10 | HHpred | | DDC--HLPLAMIFTLALAYIILGVSGNLALIIIILKQKMRTNILIVNLSFSDLLV----AIMCLPFTFVYTLMDHWVGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWRP--NNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPLDA-YKDKYVCFDQFPSDS-HRLSYTTLLLVLQYFGPLFIFICYFKIYIRLKRRNIFYRSSETKRINIMLLSIVVAFWLPLTIFNTVFDWNHQTCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFCD----- |
4 | 4n6hA2 | 0.08 | 0.07 | 0.91 | 0.54 | DisCoVER | | --RSSLALAIAITALYSAVCAVGLLGNVLVMFGIVYMKTATNIYIFNLALADALAT---S-TLPFQSAKYLM-ETWPGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDRTPA-KAKLINICIWVLASGVGVPIM---VMAVTRPAVVC-M-LQFP---SPSWYWDTVTKICVFLAFVVPILIITVCYGLMLLRLRLLSGSKKDRSLRRITRMVLVVVFCWAPIHIFVIVWTLDRRDPLVVAALHLCIALG-YANSSLNPVLYAFLDENFKRCFRQL---------- |
5 | 5ztyA1 | 0.11 | 0.10 | 0.91 | 0.15 | MRFsearch | | ----SGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHKPSYLFIGSLALADFLASVVFACSFVNFHVFHG----VDSKAVFLLKIGSVTMTFTASVGSLLLAAIDRYLCLRYPPSYKALLTRGRALVLLGIMWVLSALVSYLPLMGW----------TCCPRPCSELF---PLIPNDYLLSWLLFIAFLFSGIIYTYGHVLWKAHQHVAMRLDVELAKTLGLVLAVLLICWFPVLALMAHSLATTLSDQVKKAFAFCSMLCLINSMVNPVIYALRSEEIRSSAHHCLAHWK----- |
6 | 6me2A2 | 0.10 | 0.10 | 0.94 | 1.92 | SPARKS-K | | ---RPSWLASALACVLIFTIVVDILGNLLVILSVYRNKKAGNIFVVSLAVANLVVAIYP-YPLVLMSIFNNGWN--FGYLHCQVSAFLMGLSVIGSIWNITGIAIDRYLYI-HSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAGTLQYDPR--IYSCTFAQSVS-------SAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRGIDF--RNFVTMFVVFVLFAICFAPLNFIGLAVASDPASMVPRILFVASYYMAYFNSCLNPIIYGLLDQNFRKEYRRIIVSLCTARVF |
7 | 2ziyA | 0.12 | 0.11 | 0.96 | 0.66 | MAPalign | | --QVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKLQTPANMFIINLAFSDFTFSLVNGFLMTISCFLK---KWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLC-NCSFDYIS----RDSTTRSNILCMFIGFFGPILIIFFCYFNIVMSVELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALAQPLEWVPYAAQLPVMFA-KASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF |
8 | 2z73A | 0.13 | 0.13 | 0.98 | 0.39 | CEthreader | | FDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKLQTPANMFIINLAFSDFTFSLVNG--FPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDST----TRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMGANAEMRLAKISIVIVSQFLLSWSPYAVVALLGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF |
9 | 5o9hA | 0.11 | 0.10 | 0.96 | 1.40 | MUSTER | | NTLRV--PDILALVIFAVVFLVGVLGNALVVWVTAFEAKINAIWFLNLAVADFLACLALPALFTSIVQH---HHWPFGGAACSILPSLILLNMYASILLLATISADRFLLVFKPAWCQRFRGAGLAWILCAVAWGLALLLTIPSALYRVVREEYFPP----KVLCGVDHDKR--RERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSARETRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFSPTFLLLKKLDSLCVSFAYINCCINPIIYVVAGQGFQKSLPELLREVLTEESV |
10 | 6kp6A | 0.12 | 0.11 | 0.91 | 1.36 | HHsearch | | --------TVEMVFIATVTSLVTVVGNILVMLSIKVNRLQNNYFLFSLACADLIIGAF----SMNLYTVYTIKGYWPGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKRTV---PDNQCFAQFLSN----PAVTFGTAIAAFYLPVVMTVLYIHIYLASRSRVHSQMAARERKVTRTIFAILLAFILTWTPYNVMNTFCQSCI-PDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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