>PF04782 (312 residues) LLDVVKEVDELFLRAYECGKDVSKLLEARKVHYHSNFVDSRGYESHSKRVLQAISLGHRG SSKTPLKVVASEDHLSSPEDSGKAGSHAGTLDSLLAWEKKLYEEVKNTEVIRAEYRKKCS PKLQEEMSDTTRSMIKTLSTKIQVSLQGVDTAISAINKLKEDELHTQLVQLIEGLMNMWN ELYDCHQRQHKIASDMKSLDHWGTVEPTTNIHRVATSQLELALGAWLAGFNKLISAQRDY LHNLTGWLRLSNMQLELESARETPGSKKKQATARPAWLASMLQLCLDWSLALDRLPDKVA SESIKSFEAVVH |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LLDVVKEVDELFLRAYECGKDVSKLLEARKVHYHSNFVDSRGYESHSKRVLQAISLGHRGSSKTPLKVVASEDHLSSPEDSGKAGSHAGTLDSLLAWEKKLYEEVKNTEVIRAEYRKKCSPKLQEEMSDTTRSMIKTLSTKIQVSLQGVDTAISAINKLKEDELHTQLVQLIEGLMNMWNELYDCHQRQHKIASDMKSLDHWGTVEPTTNIHRVATSQLELALGAWLAGFNKLISAQRDYLHNLTGWLRLSNMQLELESARETPGSKKKQATARPAWLASMLQLCLDWSLALDRLPDKVASESIKSFEAVVH | |||||||||||||||||||
1 | 3i2wB | 0.08 | 0.05 | 0.61 | 0.62 | DisCoVER | PGNYKRTTKRIEDGYKLCNDLQQLIQE------------------RADIEKGYAKSLRTWSKKWGELIKGPEYGTTEAAWKGVLTESERIS--DV--H-KIK--DN--------------------------------------LCNDV------------------------NSQIKTWQKENYIKERKDL-------------------E-DLF--K--KAQKPWAKLL-----KVEKAKADYHSACKTERSATNQEANADSSLSPDQVKKHDRVTKDQVQKCREKYEQA------AEITKYNSYDTSV- | |||||||||||||
2 | 6ijcA | 0.04 | 0.03 | 0.70 | 0.67 | DEthreader | ------------------------------------T-------RY-T--APT-QDIQYLLHDVDVANDPTPGY-----------LEPDFTSAVLEEAG-KI-AGEVLHPLNAVGDQEG----------L--G-VRPPKGFKEAFDQVREGGWTALDGQNMPLLTAVGESQGLTHGAASAILVGTDQQKDTYQDGSYAISGQKIF--GEHD--MAENIIHLVFILGGRAMFTMMNVSLLTPVIKGFLTDEGYDMTVQAQQVYHGYIEETGMSQFTRDARIAMIYEGANGVQALDGR---------------- | |||||||||||||
3 | 2q13A | 0.07 | 0.07 | 1.00 | 0.61 | CEthreader | LGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLDEVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEVASDPLYVPDPDPTKFPVNRARTWDRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESKKD | |||||||||||||
4 | 7jloA | 0.09 | 0.07 | 0.78 | 0.77 | EigenThreader | -----------------------------PWHHIENLDLFFSRVYNLHQK-------------------------------NG---------FTCMLIGEIFELMQFLFVVAFTTFLVSCDAFLQVCSARIQELITILVIAGVFWIHRLIKFIYNICCYWEIHSFYLHALYHRILRFQNYMVALVNKSGLKYNFELILFWGPGSLFLQRLELAQRLSNRILWIGIANFLLQSRLNRGPASKYMNCLLAKNGAFFAGSILAVLIALTIYDTVTLLGVTVTVCREQLLRVILAHIHYMPLSPIVTPLILIFCLR | |||||||||||||
5 | 3pltA | 0.13 | 0.08 | 0.61 | 0.35 | HHpred | LVKTEKGVLRAMEVVASERREAAKQLSLWGADNDDDV------SDVTDKLGVLIY-E-LG---------ELQ-----DQFIDKYDQYRVTLKSIRNIEASVQPSRDR----KEKITDEIAHLKYKDKIPVLEQELVRAEAESLVAEAQLSNITR--------------EKLKAAYSYMFDSLRELSEKFALIAGYGKALLELLDPGYDGYASRQIIMDAESALESWTLD----------------------------------------------------------------------------------- | |||||||||||||
6 | 4l3iA2 | 0.12 | 0.08 | 0.69 | 0.47 | MRFsearch | --EEESLKERLIKSISVCQKELNTLCSE-------------------------------------------------------ILQLEKDLRTQVELRKQKKERKQELKLLQEQDQELCEILCSLEELNQFRQHVTTLRETKASRREEFVSIKRQIILCEESQNEAVCEGLRTQIRELWDRLRKALQLEVDRLEELKQ-------------NKKVIEAIRVELVQYWDQCESLLQLHDAEIVRLKNYYEVH---------------------------KELFEGVQKWEETWRLFLEEELKARIELWEQEH- | |||||||||||||
7 | 2r02A2 | 0.12 | 0.11 | 0.91 | 0.94 | FFAS-3D | -QRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQSILTKSRSVIEQGGIQT-------------VDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFNELYKPLR--AEGTNFRTVLDKAVQADGQVKECYQSHRDTIVLLCEPELNAAIPEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSDGVINEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANL----------REEVLKNLATAYDNFVELVANLKENELTEILVRFQNKC- | |||||||||||||
8 | 7jh5A | 0.12 | 0.10 | 0.81 | 0.94 | SPARKS-K | LLEASTKLQRLNIRLAEALLEAIARLQLELVYLAVELTDPKRIRDESKEIIKEIDDAAKESEKILEEAREAISGSGSELAKLLLKAIAETQDLNLRAAKAFLEAAAKLQELNIRAVELLVKLTIREALEHAKRRSKEIIDEAERAIRAAKRESERIIEEARRLIEELARELLRAHAQLQRLNLELLRELLRALAQLQELNLLASELTDPDEARKAIARVKRESNAYYADAERLIREAAAASEKISREAERLI------------------------------------------------------------ | |||||||||||||
9 | 5j1iA | 0.10 | 0.08 | 0.79 | 0.85 | CNFpred | QQKAQAEVEGLGKGVARLSAEAEKVLAL---------PAAPTLRSELELTLGKLE------------------------------QVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQAEAQQPTFDALR--DELRGAQEVGERLQQRHGERDVEVERWRERVAQLLER---------WQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-------DSQAVR---------EQLRQEQALLEEIERHGVEECQRFAKQYINAIK | |||||||||||||
10 | 1y1uA | 0.10 | 0.06 | 0.60 | 0.83 | DEthreader | -SQKHLQINQRFEELRLITQDTENELKKL-----------------------------------------------------TQEYFIIQYQESLRIQAQFAQ-LGQL--NP--------------------------Q-ERMSRETALQQKQVSLETWLQRE-AQTLQQYRVELAEKHQKTLQLLRKQQTIIDDELIQWRRAPPEGS----L-DVLQSWCEKLAEIIWQNRQQIRRAEHLCQQ--LP--------------------------------IPGPVEEMLAEVNATITDIISALVTSTFILLT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |