Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | QANQLLPQLSDNDSEIAKAKKSLDAEIKNANQAVASNNTASMQSAKSSLDAKVTEITKKLETFNKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSDIESANTELKQALAKANADKVQADNLAKSIKEQLNNSV |
1 | 2tmaA1 | 0.08 | 0.08 | 0.93 | 1.04 | FFAS-3D | | --DAIKKKMLDKENALDRAEQAEADKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQK--------LEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEA- |
2 | 6cq0A | 0.06 | 0.05 | 0.92 | 1.17 | DEthreader | | SNQEVSREPLN-TI-G--L-IY--EK--ISL-PKVHPMAKAITGVVCYACRIASTLLLYQELMRKGIRWLIELIKDDYNETVHKKTEVVILSSQGTIETSLQDIDSRLSGLAAWAWIRKMLHLRKQLLSLTNQCFDIEEEVSKYQEYTNE-LQ-ET |
3 | 4tqlA1 | 0.14 | 0.12 | 0.82 | 0.77 | DisCoVER | | YMVQELEKARDMEKLYKEMVELIQKAIELMRKIFKLKIMQEAKQMEKLLKQLKEEMKKMK----EKMEKLLKEM---KQRMEEVKKKMD-DELLEKIK-KN---------I------DDLKKIADLIKKAEENIKEAKKIAEQLVKRAKQLI---- |
4 | 2zxlA | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | | -------V-PTRKQLMVDLMSTVELQQLLPCNLPPDVR---L-IRSDFV--I---GSWI-I-------GFLNTKAPLYYTLDSHRQSLKEVN-PYVS-RAFS-PTA--------EILDHVSPAAKEVLEVWLCV-LRDSFRRKSIEDDLDQFPMFV |
5 | 6jlcA | 0.14 | 0.12 | 0.90 | 0.66 | CEthreader | | IGLTVDKSANNLRYKIQKAHVELGFSVTRAIMRVANATVYQLNDSISDLRATYERVSTDLKSTDTATIYVKDLLNKAIWNTRVARDKEILTHKNFRTYQTLNKEITKAVRVWFKATVAECDAAIAKLNTAYATAYSAPSV---------------- |
6 | 5w53A | 0.05 | 0.04 | 0.94 | 0.72 | EigenThreader | | YFFDEFKRYASYHIHKTKVNSLLNEASRAIGICKKEAFRGCLLNKNRKNLDQIKKINNEIRDLLEVYFDMIKIYLVDFKKYDTFIKVTINAIKFTQKEMYHLQKVKHSIDQVTALSDGYYSIFKFGKDSLEKIVHNLLGELFGH----------LE |
7 | 6d03E | 0.11 | 0.10 | 0.94 | 0.29 | HHpred | | --EERISKLIDSEYFITETLKLAEDVYDKNTKLIINEFKKDYDNNVEDLRESIIYIQSYVSSIKS----AYRYNVLEKDSVESKQKNIPANSNAQKKVDELLSIIDSIYSNF---SVAENFQKMKDYYKEIEKLKIKILQLIEAIKKYQQHVEELI |
8 | 6f1tX | 0.13 | 0.13 | 0.98 | 0.42 | MRFsearch | | --EQMHKELTDKLEHLEQEKHELRRRFENREGEWEG-RVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRAEVERQLSMQVHALKEDFREKNSSTLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILE |
9 | 6tpiA1 | 0.09 | 0.08 | 0.94 | 1.02 | FFAS-3D | | --KSIQADIAAKERAVRQKQQQRASLLAQLKKQEEA--ISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHQETIAQLKQTREE-----VAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGL- |
10 | 4uosA | 0.15 | 0.15 | 0.99 | 0.85 | SPARKS-K | | EVKKMLEKMIEEEKAIKKVKEMLEKMIKEIKKMLENGELKMVIELAEKILKKAKEMAEKILKKVKELEEVKKMLEKMIEEIKKMLEKAIKKEMLEKMIKEIKKMLENGED-SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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