Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VIGTLFGHRKGHVHFAFQKNPTSQPTFMIELQTPISGLVKEMASGLVRIALECDKDDDKNKKGGNSKRLLEEPLWRTYCNGKKCGFGIKRECGEKEWKVLKAVEPISMGAGVLPAEKPSDDEKDGVVNDGEIMYMRAKFERVVGSRDSEAFYMMNPDSNGAPELSIYLLR |
1 | 5fx8U1 | 0.07 | 0.05 | 0.71 | 0.83 | DisCoVER | | QPIKLSNAGGVEWFVDIPGAF-GDITNIISTVQPGTFD----------CSEVKYAVGSTPQDRSSGEWILPVESFECGDGT--ISLSFAG---------E--LADVLRVSFLS--------NLADDV---LEVQNVVNVDLTT-ADALTSFVLDEP-------------- |
2 | 3e49A | 0.08 | 0.06 | 0.71 | 0.67 | DEthreader | | SVIITCAVVQIGAAGAA----------VIHLHFFLPRIKSNT---DAVELASLN-G-S-N-FGLY-S---NTFIILTCG-GNGTRFFECYDFGLLGAGRHQIASANVRV-GLEDSLWGEL------AE-TNAQVASPEART-------LGLKGPQVNF------------ |
3 | 5o8oA | 0.08 | 0.08 | 0.93 | 0.72 | CEthreader | | QFEHEHLGDDFSASLKAINDGGLTGIFVGDYLQAVTP------------RLGLGLQAVWQRQGLTQGPDTAISYFARYKAGDWVASAQLQAQGALNTSFWKKLTDRVQAGVDMTLSVAPSQSMMGGLTKEGITTFGAKYDFQIDSKGKLSCLLEKRLGAAPVTLTFAADV |
4 | 1n7qA3 | 0.10 | 0.08 | 0.86 | 0.65 | EigenThreader | | ANATATMWNQTLKSWFMLKD----KIAFLGSNIQNT------STDTAATTIDQRKLESSNPYEGQSDKEVNEFLTISQAHNGDSYGYMLIVDRATFNQMIKELQGVWGIVKYDDSVSNQ------FQVLKRGVYTIRKEG-----DEYK-IAYYNPETQESAPVFKKL-- |
5 | 5c2vA | 0.14 | 0.10 | 0.73 | 0.39 | HHpred | | ----------GDP--YQNYPHYGSRIVLFDLN-----------TKELKVLTN----DF-----------ATAFDPCTYWDGKKFAFAGVHKKG-GGCQIWEGLRQMTDLKGYYAAGHNPTQGGPWLTPDGNILFSSVQA--NGSGEGRVMICVDNWDGAYPRPIY----- |
6 | 3zgjA | 0.16 | 0.12 | 0.74 | 0.53 | MRFsearch | | -----------RRSTVLRSG---EVTLVVTQATPVARYVERHGDSIADLAFGCDD-----------AEALQAPTFATVSGLDHVAVCLESGTLRSTAEFYEAAPYYSSEYIE-----------------VGEQAMDMIFVRNAG--GGITFTLIEPDDTRGPGVQHLAFL |
7 | 5mqrA1 | 0.18 | 0.12 | 0.70 | 0.36 | FFAS-3D | | VERKIPASKELKVSFDLSAGQNDKGILQIDF---------LDENSIACSRLELTPDGIFRKGGSRFANNYEAGKTQVYVDGKRVGLRFYAPVA--------TIERIVFRTGETPADQTYDLPDAGGQEPLAEYRIA---------------------------------- |
8 | 6mltA1 | 0.09 | 0.08 | 0.82 | 0.58 | SPARKS-K | | FANGTLYQNNGAYLWQYQANDTVWFSSVANLD----------GDDKPELVVSVPASLST----------PENSEIAVLEHDGSVKWRVNNL---------SNPGGSVQAVSSFLG-KPSSSATTADQSHMGIVYAGYYAVDMYDAQGKIGVSAYDFTGDGIDEVLVQDRL |
9 | 1tg7A | 0.09 | 0.05 | 0.62 | 0.78 | CNFpred | | -----------LTVTPLLGSNSASSFFVIRHSDYSS--------ASVEYKLTVPTS---------------AGNLTIPQL--GGSLTLSGR-----------SKIHVTDYDVA---------------GTNILYSTAEVFTWKKFNNEKVLVLYGGP---GEHHEFAVSG |
10 | 4tqjA | 0.08 | 0.05 | 0.69 | 0.67 | DEthreader | | -DIVGFGLD--GVVIGRN---A-----FLAVKNFANAG-GWLT-TKHVRLIADTT-----------GTGK-G--DIVGFGNGVYVSVNNGKN------------------V-LLDRHLGFGKCDGGWKIGDPVHRRFVVLIIGFGEKSFSKWAPE------TTVCWMANS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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