>PF04724 (332 residues) DLRALLVLLIGLPILIFVIYLHGQKVTYFLRPIWEKPPKPFKVLPHYYNENVSMGHLCKL HGWKVRETPRRVFDAVLFSNELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKEN RQRFEFAESRLTYGMIGGRFVKGENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEI PSGHTINLLRWCDDIPEVLHLQLRNYLYSFEFFLDDKSWRASIHRYRAGKTRYAHFRQTD DLLADSGWHCSFCFRYISDFVFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLPE EYTFQEIIAKLGPIPSTYSAVHLPAYLLETCS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DLRALLVLLIGLPILIFVIYLHGQKVTYFLRPIWEKPPKPFKVLPHYYNENVSMGHLCKLHGWKVRETPRRVFDAVLFSNELDILDIRWHELSPYVSEFVLLESNSTFTGLKKDLHFKENRQRFEFAESRLTYGMIGGRFVKGENPFVEESYQRVALDQLIKIAGITDDDLLIMSDVDEIPSGHTINLLRWCDDIPEVLHLQLRNYLYSFEFFLDDKSWRASIHRYRAGKTRYAHFRQTDDLLADSGWHCSFCFRYISDFVFKMQAYSHVDRIRFKYFLNPKRIQHVICQGADLFDMLPEEYTFQEIIAKLGPIPSTYSAVHLPAYLLETCS | |||||||||||||||||||
1 | 6yv7A | 0.12 | 0.08 | 0.70 | 1.06 | DisCoVER | -----ML-LEAIA------------------------------ILTAHAPYYAKRWLKKPWDVAPDPYRPRVTVIVPTYNEAPLIEEKLDNIYDYKLEVVVVDSAST-----D-GTPSAVRRWAPDL--ALTLVEETER----------R-GKAHALNTAL-RH-A-TGEIVVITDADALWARDTLANAVKWLADTVGAVSCVKRPVAESAWATPIFHGELAAFKRELLGFPTDDTAYRAITPPDVVCVEA----------------------------------------RAQHLVQHFAAPPF-ILHAEAYLHLANPWALTAAAAL-AA- | |||||||||||||
2 | 4fixA | 0.05 | 0.04 | 0.73 | 0.83 | DEthreader | -----RPGEPLVRRAHAPSLQIGSEVSF-ATYFNAFVVLRVQ-------RTAEVVLQ-FED-ASPAPGTANIAVGIPTRDCVNALRELTADLVDQVIGAVIVPDQG-----ERKVRDHPDFPAAAARLGSRLSIHDQPNL--------GGSGGYSRVMYEALKNTDC--QQILFMDDIRLEPDSILRVLAMRFAKAPMLVGGQMLNLQEPSHLHIAEYYNGCMIPRQVAEGQPDYGLAPTVTLPGAAIWHMA-------SD--KD---DWQAAVVTTADGCGV------------------------------------------------- | |||||||||||||
3 | 6yv7A | 0.08 | 0.07 | 0.88 | 0.87 | CEthreader | ---------------------------MLLEAIAIALTAAHFGAPLLYYWRAKRWLKKPWDVAPDPTYRPRVTVIVPTYNEAPLIEEKLDNIYEQDY-----PRDKLEVVVVDSASTDGTPSAVRRWAETHPDLALTLVEETER---RGKAHALNTALRHA------TGEIVVITDADALWPADTLANAVKWLADPTVGAVSCVKRPRDFYNVLRVGELAAFKRELLERLGGFKIAMMGYRAITPPDVVCVEAVPKRGYHAWRIRRAQHRDGKAPPPFKPILHAEAYLHLANPWALPTAAAALAAAAAAGSLPAAALLATGAALALYKPYRT | |||||||||||||
4 | 6yv7A | 0.08 | 0.07 | 0.80 | 0.95 | EigenThreader | MLLEAIAIALTAAHFGAPLLYYWRAKRWLKKPWDV---------------------------APDPTYRPRVTVIVPTYNEAPLIEEKLDNIYEQDYPVVVVDSAST---DGTPSAVRRWAE--------THTLVEETERRG----------KAHALNTALR---HATGEIVVITDADALWTLANAVKWL---ADPTVGAVSCVAE-------SKAWATPIFAFKRELLERLGGKIAMMGYRAITPPDVAV---PKRVQHFAKAIRDGKAPPPFKPILHAEAYLHLAALPTAAAALAAAAAAG----SLPAAALLATGAALALYKPYRTWTT | |||||||||||||
5 | 6s22A1 | 0.13 | 0.10 | 0.73 | 0.29 | HHpred | ----------------------------ELKPFLDRPLQD-PNAPGASGKAFNRPPECIEQKFKRCPPLPTTSIIIVFHNEASTLLRTVHSVMYTSLEIILVDDASVDE-YLH-----DKLDEYVKQFQIVKVVRQKER-----KGL---ITARL---LGASV---ATGETLTFLDAHCECFYGWLEPLLARIENPVAV-VSPDIASIDLNFSKPSHSHNRGNFGWESLPKHENKRRETYPIRTPTFAGGLFSIS--KDYFEYIGSYDEEMEIW--GGENIEMSFRVWQCGGQL--------EIMP-------------------------- | |||||||||||||
6 | 6exnV | 0.11 | 0.08 | 0.72 | 0.58 | MRFsearch | --RQLIASGISAQRQTLPVYAMRSELIQAVRD------NQFLVIVGESGKTTQITQYLDEEGFSN---YGMIGCTQPRRVAAVSVAKRVAEEGHDVGYTIRFED--------TRIKYMTREALLDPEMSKYSVIMLDEA--------HERTVATDVLFALLKKAAIKELKVIVTSA---TLNSAKFSEYFL---NCPIINIKT----------------FPVEVLYSQTP----------------------QMDYIEAALDCVIDIHINEGGDILVFEEIDSCCEILYDRVKTLGDSIGELLILPVYS----------------------- | |||||||||||||
7 | 1v47A2 | 0.08 | 0.05 | 0.62 | 0.60 | FFAS-3D | --------------------------------------------TPLEKTPEEVRAFFRQRGW------RKVVAFQTRNAHRAHEYL-IRLGLELADGVLVHPI--LGAKKPDDFPTEVIVEAYQALIRDFLPVAFFGLATPMRYAGPKEAVFHALVRK-----NFGATHFLVGRDHAGVGDFAAHRIFDRLPPLGIEI-VKVGAVFHC--------PLCGGIASERTCPEGHREKRTA---------------------------------------ISMTKVRALLREGKAP--------------------PSELVRPELLPILRRGV- | |||||||||||||
8 | 2d7rA1 | 0.10 | 0.08 | 0.85 | 0.77 | SPARKS-K | YPMTDAERVDQAYRENGFNIYVSDKIS-LNRSLPDIRHPN-----------------CNSKRY--LETLPNTSIIIPFHNEWSSLLRTVHSVLNRSPEIVLVDD-----FSDREHLKKPLEDYMAL-FPSVRILRTKKREG-----------LIRTRMLGASVATGD---VITFLDSHCEANVNWLPLLDRIARNRKTIVCPMIDVIDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGDRKWFWELGGYDPGLEIWG--GEQYEISFKVWMCGG--------RMEDIPCKYVPYKVPAGVSLARNLKRVAEVWM | |||||||||||||
9 | 1yiyA | 0.12 | 0.08 | 0.70 | 0.81 | CNFpred | -----------------------------------------------------SKLYSQLVDRTIN----PMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPF-----------FDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE----KTKMIIINTPGKVMDRAELEVVANLCKKWNVLCVSDE-VYEHMVFEPF-GMWERTITIGSAG----KTFSLT---GWKIGWAYGP-----EALLKNLQMVHQNC-VYTCATPIQEAIAVGFETELKRLK--SPECYFNSISGELM---------AKRDYMASFLA | |||||||||||||
10 | 4hg6A | 0.10 | 0.07 | 0.72 | 0.83 | DEthreader | ---L---ALLLFAVETFSISI------------------------D-----------R-PFPRPLQELPTVDILVPSYNEPADMLSVTLAAAKNMLRTVVLCDDGQ----ELKAQRRRELQQLCRELG-VVYSTRERNE-----------HAKAGNMSAALERLKG---ELVVVFDADHVPSRDFLARTVGYVEDLFLVQTPHFFINP---DRCPPNEYCAAVLRRRADEAGDAEALKSLYIDRAMIAGLQP-------ET-ASF-QQGRYLVTAKDETLSENYEKQQRRA----------PRVQLDAGVRLL-M-------VAYLIFGFG- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |