Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | QIKKINDIIQNCNAVFSNEVNLLYNEKFIFLEKNLNGLPFKAHIYNNVSRFDNKTIFRVVKYVYKNRPKILKLIFPNNSFFESLEPLLPVKTINLSYNNTINDDLQDNTLSTKMILLELFNSFKFGKGSNYLVKYPYYYLP |
1 | 1e9sF2 | 0.03 | 0.03 | 0.97 | 0.57 | DisCoVER | | VT-VAGVPMPAEPRHLLVNGATGTGKSVLRELGGDRMVIVDPMLKDIILNPYDQRTKGW-SFFNEIDWQRYALSVVRLPEHVPDGDFSNLFITWRLWLFILTKGRAGLRVVAGRSLVV-LGGSRNEDMSVMPAEIANLDL- |
2 | 2a8eA | 0.11 | 0.09 | 0.79 | 0.83 | DEthreader | | --KVRPKLTALGFATLSALDEFASKRGYKHFQIGL-HVFVWFAIIYESP--IKEEYGKLLEVNQETITKIPFVWSHQLTLFERLTVKKA-ELLCGIQRIDD---A---FKQL-AFLYRLTQKVTQ---------------- |
3 | 1jx0A | 0.08 | 0.08 | 1.00 | 0.56 | CEthreader | | TAITVENLEYPAVVTSPVTGKSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSP |
4 | 1vrbD | 0.06 | 0.06 | 0.94 | 0.67 | EigenThreader | | EVERFTSILAIYNNPVVEALEWYEKGAALEFDFPAGTSSKAVYAAKNGGGFKAHFDAYKTWKLAKNEN---VSNPYPDDLQSLWHSDQATALNITFGQPAWL------DLLAALRKKLISLIQTLSENAETLTPEQIFQSQ |
5 | 5es2A | 0.12 | 0.06 | 0.55 | 0.44 | HHpred | | -HTGLSTILH-ANADCCEDKEVLIAARHV-IERPEIESVRENN-FSDIAGFQLISVLTLIQNIKTCRTDAIEACV--TKRKEEL--------------------------------------------------------- |
6 | 3zziA | 0.10 | 0.05 | 0.50 | 0.52 | MRFsearch | | -ADALRKALQRDAESVASYLRYLENSDFVSYADEP-LEAVAIVKKDTNV--------------------------------------PTLDKFVCSDA---------------NVTDNVFNVLRR---------------- |
7 | 6rbdy | 0.13 | 0.12 | 0.91 | 0.45 | FFAS-3D | | ----VFKLINQPRLMFQREFALRLLARPVTHIMKVESSVVRLEIKNPRPQVDYNEWDGLLRIVFVRKNRTISAGFKSTTVMDILEK--NYKTFLAMNNEMVDDTKGSMHDVVKEKIDTVLKETDLGDKRAGKCD------- |
8 | 3trcA | 0.07 | 0.06 | 0.92 | 0.54 | SPARKS-K | | ILRQITQEVNAAPNLLKLVVVRLCEDACSLFICDDVHGEYVLATQGLNLRLKFGE--GLIGLVGEREADAPLHPAYKHRPELGEEDYHGFLGIPIIEQLESHHFAEEEEAFCVTLAIHLAAEIAHARAKGAL--------- |
9 | 5kl0A | 0.06 | 0.04 | 0.72 | 0.54 | CNFpred | | LTWNTVEQVEEAG-GHAFIKEKMRSENAVYGGEM----SAHHYFREFAYADSGIPWLLIAELVSQSGRSLADLVE---ARMQKFPC---SGEINFKVA------------DAKASVARVMEHYAS---------------- |
10 | 6ijcA | 0.05 | 0.04 | 0.79 | 0.83 | DEthreader | | PTDIQYLLHVLVDYLEPDFTSAVLEEAGAWLD------PYLLGVG--MFSGNQAFTMYQGLTHGAASAIGTMNLTKIISAGEHDMA--------------------RAMFTMMNEARIGVGMQGLFIGA-FVIFLTDGDAR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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