>PF04662 (227 residues) FIAQPCGRVLVFDVASHTPSFFTRYSVELSLRALDPLFTRAVTDFRYTQNEIDLFCVSLG FLLPILLTGESYSWRGHLNLPLSYTELLVRWGLAVGYFPAFSADGDIRQNPELRIDLSTM STRSFYEQFLLRYNTSGLAKAIVGQQECFQSGMESFKRFLHYRLTCFESCLPRPRWESPL APGPYLDRAFEATLLGRMVGHNQLLFTGLSSDITRYYNELVVEGVPV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | FIAQPCGRVLVFDVASHTPSFFTRYSVELSLRALDPLFTRAVTDFRYTQNEIDLFCVSLGFLLPILLTGESYSWRGHLNLPLSYTELLVRWGLAVGYFPAFSADGDIRQNPELRIDLSTMSTRSFYEQFLLRYNTSGLAKAIVGQQECFQSGMESFKRFLHYRLTCFESCLPRPRWESPLAPGPYLDRAFEATLLGRMVGHNQLLFTGLSSDITRYYNELVVEGVPV | |||||||||||||||||||
1 | 6b4oA3 | 0.03 | 0.02 | 0.51 | 0.68 | DisCoVER | ------------------------------------------------MK--TY--DY-IV----------------IGGGSGGIASANRAGMHGANVLLIEGNEIGGTLNNIERIHG----------------------------------Y--AT--FT--GE-QTIEVTEYTAPHILIATGGRRQPNTDQLGLENTKVALDEKG-YVGIYAVGVIPVAIAAGR- | |||||||||||||
2 | 6u8yX | 0.04 | 0.03 | 0.69 | 0.83 | DEthreader | --SEQSTASGIGGILALQEDIRKLFA--YSSISQIGYILIGLG--IGTPLGIAAATYHAISHALFKGL-FFLIVIFFAFVAILSLIMAGFASKWLFFGSGFLITYA-----------PLAIGMGILA--------------------------------------------------ILNVIFGVA-PGLVARE-LNKLFSNPPIGGTELDLRYNGLLLSIWLVGLA | |||||||||||||
3 | 2xubA | 0.08 | 0.07 | 0.83 | 0.52 | CEthreader | -----------------------------MTQAEIKLCSLLLQEH-FGE-IVEKIGVHLIRTGSQPLRVIAHDTG---TSLDQVKKALCVLVQHNLVSYQVHKRGVVEY--EAQCSRVLRMLRYPRYIYTTKTLYSDTGELIV--EELLLNGKLTMSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVDGIYWQANLDRFHQHFRDQAIVSAVA | |||||||||||||
4 | 2vsqA | 0.07 | 0.06 | 0.85 | 0.55 | EigenThreader | YDGDEMLIKLAYNENVFDEAFILRLKSQLLTAIQQLIQNKEAVNANPDSGQRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGA--------------AYLPVDPKLPEDRISYMLADSAA-------------------ATRFEEANIQGLVKHVDYMAFSDQDSNYAFDAFTFDFYASMLLTDLILQENVNALFNLLTDAGEDWMKGLRCI | |||||||||||||
5 | 2pffB | 0.16 | 0.13 | 0.80 | 0.33 | HHpred | ----SQGLVTAIAETDSWESFFV--SVRKAITVLFFIGVRCYEAYPNTSLP-----PSI-LEDSLENNEGVP--SPMLNLTQEQVQDYVNKTNS--HLPAGKQ-------VEISVNLVSGPPQSLYGLNLTLRKAK-APSGLDQSRIP-----------------FSERKLKFSNRFLPFHSHLLVPASDLINKDLVKVSFNASISERIVDCIIRLPVKWTTQ---- | |||||||||||||
6 | 6bq1A | 0.15 | 0.11 | 0.78 | 0.50 | MRFsearch | --------------------GGMMQCVIAVADKVFDAFLNMMADKAKTKENEEELERHAQFLLVNFNH----------IHKRIRRVADKYLSGLVDKFPHLLPYYDIPD-APYRITVP--DTYEARESIVKDFAARC----GMILQEAMKWAPTVTKSHLQEYLNKHQNWVS--------GLSQHTGLAMATESILHFAGYVKKDYSNFMASLNRYAGEVYG----- | |||||||||||||
7 | 2q13A1 | 0.07 | 0.06 | 0.79 | 0.64 | FFAS-3D | ------------ETLEDSPQT--RSLLEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKE----YEKQRFPLDEVMSSTLQQFSKVI-------------------------DELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINR-YSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIA---- | |||||||||||||
8 | 4xhjA | 0.09 | 0.09 | 0.98 | 0.58 | SPARKS-K | LNPGPSYRVYLLGRVDICAYPEESLDYRYHLSMAHTEALRMTTKADQHDIESYYHIAARIATSIFALSEMGRTTE---YFLLDEIVDVQYQLKFLNYILMRIGAGAHPNTISGTSDLIF-ADPSQLHDELSLLFGISYDEARDQLKTAYALSHVNALSLARRVIMSIYKGLLVKQNLNATERQALFFASMILLDGRTTLLLTAAHATQAALNIQEGLAYLNPSKHMF | |||||||||||||
9 | 3m1cA | 0.12 | 0.11 | 0.93 | 0.74 | CNFpred | ------YRVFVLGA-GSALDALRRVAGYPESTNYAQYMSRAYAEFL-PSLFWRLAGLLASSGFAFVNAAHDAIRLSDLLGFLAHSRVLAGLAARGAAGCAAD-------SVFLNVSVLDPAARLRLEARLGHLVA-SLVAHALGYQLAFVLSPAAYGAVAPSAARLIDALYAEFLGRALTAPMVRRALFYATAVLRAPFL-QRERARRGLLITTALCTSDVAAATHA | |||||||||||||
10 | 3t58A | 0.06 | 0.04 | 0.70 | 0.83 | DEthreader | -------DADSVTVAWAV--EFFALDCAEETNS---------------YMADLESALHYILRVEVG-K-FS--------VLEGRLVALKKFVAVLALINWLKQQ---KKRIPSFFAADSR-----------V--L-----NWVGCQGS-PHF-RGFPCSLWVLFHFLTVQARYSAH--EP-ADGQEVLQAMRSYVQFFGCRD--SADHFEQMAAASMHQV------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |