Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MARYPKKSIKKRRVGRRKYGSKAATSHDYSSSGSILVPENTVKVFRIEPTDKTLPRYFIWKMFMLLVCKVKPGRILHWAMIKSSWEINQPTTCLEAPGLFIKPEHSHLVKLVCSGELEAGVATGTSDVECLLRKTTVLRKNVTEVDYLYLAFYCSSGVSINYQNRITYHV |
1 | 6s44A | 0.21 | 0.18 | 0.86 | 6.39 | HHpred | | ----------------------AVPTTRVVVHQSAVLKKDDVSGSEIKPEG-DVARYKIRKVMLSCTLRMRPGELVNYLIVKCSSPIVNWSAAFTAPALMVKESCQDMITIIGKGKVESN-GVAGSDCTKSFNKFIRLGAGISQTQHLYVVMYTSEAVKTVLEHRVYIEV |
2 | 6s44A | 0.14 | 0.11 | 0.76 | 2.49 | DisCoVER | | HQSAV-------------L--KKDDVSGSEIKPARYKIR--K-------------------VMLSCTLRMRPGELVNYLIVKCSSPIVNWSAAFTAPALMVKESCMITIIGKGKVESNGVAGSDCTKSF-NK--FIRLGAGISQTQHLYVVMYTSEAVKTVLEHRVYIE- |
3 | 6s44A | 0.21 | 0.18 | 0.84 | 2.55 | MRFsearch | | -------------------------TTRVVVHQSAVLKKDDVSGSEIKPEG-DVARYKIRKVMLSCTLRMRPGELVNYLIVKCSSPIVNWSAAFTAPALMVKESCQDMITIIGKGKVESN-GVAGSDCTKSFNKFIRLGAGISQTQHLYVVMYTSEAVKTVLEHRVYIEV |
4 | 6s44A | 0.21 | 0.18 | 0.86 | 2.60 | SPARKS-K | | ----------------------AVPTTRVVVHQSAVLKKDDVSGSEIKP-EGDVARYKIRKVMLSCTLRMRPGELVNYLIVKCSSPIVNWSAAFTAPALMVKESCQDMITIIGKGKVESN-GVAGSDCTKSFNKFIRLGAGISQTQHLYVVMYTSEAVKTVLEHRVYIEV |
5 | 6s44A | 0.22 | 0.19 | 0.86 | 2.28 | FFAS-3D | | ----------------------AVPTTRVVVHQSAVLKKDDVSGSEIKP-EGDVARYKIRKVMLSCTLRMRPGELVNYLIVKCSSPIVNWSAAFTAPALMVKESCQDMITIIGKGKVESNGVAG-SDCTKSFNKFIRLGAGISQTQHLYVVMYTSEAVKTVLEHRVYIEV |
6 | 1cz7D | 0.05 | 0.04 | 0.84 | 0.83 | DEthreader | | -QQAALETCELQSERKLHVMRGNIRV---FC---RIRPPLPQIFMVSPL----SALDGYNICIFAYGQTG-----KTYTMD--------GVPESVG-IPRTVDLLFDS-ATFLEYYLLSNE-TEEHLMHTAKMNRTASTAGNERSRSHAVTKLELSVGNSKTLMFINVSP |
7 | 6f2sH | 0.07 | 0.06 | 0.84 | 1.00 | DEthreader | | --------------RKPYREGPCKV-QSYEQ--RHDISHVGKVLCVSVTRGVGKRF-CVKSVYVLGKIWMKNHTNTVMFYLVRDRRGQVFNMNEPSTATIKLDRYQ-VLRK-FTS-TVT---GGASKEQALVKKFMKIN-NYVVHALLLYMACTHSNPVYATLKI-RIY- |
8 | 6f2sH | 0.12 | 0.08 | 0.68 | 0.43 | MRFsearch | | -------------------------------------------------------RFCVKSVYVLGKIWMDETNTVMFYLVRDRGTAMDFGQVFNMSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVKKFMKINNYVVTENALLLYMACTHPVYATLKIRIYFYD |
9 | 4b9gA | 0.16 | 0.12 | 0.75 | 0.62 | SPARKS-K | | ---------------DIDSAVRIIPVNYQLYTVEMTIPAG-VSAVKIVPTDSG-------QQIGKLVNVNNPDQNMNYYIRKDSGA-GKFMAGQKG-SFSVKENTSYTFSAIYTGGEYPNSGY----------------SSGTYAGHLTVSFYSNDNATKNFPVSTTIS- |
10 | 2a6yA | 0.08 | 0.06 | 0.78 | 0.79 | MAPalign | | ----------------------------PDLINTRKVPNNWQTGEQASLEEGRIVLTQNSKGSLWLGFDLKGQTDGGISFWFVQD----SNIPRDKQLYNGPVNYDGLQLLVDNNGQLNDGQKPVDKTKIYDQFQTRKVRFPSGSYRIGVTAQNGAAESFEIFK------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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