>PF04639 (297 residues) GNNRFQPGYQLSNNQFVSTSDINRITRNNDVPNIRGVFQGISDPQINSLGQLRRVDNVPD FNYHTKQTRSNAVKQNFPETNVRTPEGVQNALQQNPRLHTYMQSLKVGGTGILLATGGYF LFSAATLVQDIINAINNTGGSYYVQGKNGGENADACLLLQRTCRQDPNLNQSDVAICPFD PLLPNNPPELTNMCQGFNYEVEKTVCRGSDPSADPDSPQYVDISDLPAGQTLMCIEPYSF GDLVGDLGLDWLLGDEGLVGKSSNVSDSVSGKLMPIILLIGAVLFLGLIFYFIYRYI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | GNNRFQPGYQLSNNQFVSTSDINRITRNNDVPNIRGVFQGISDPQINSLGQLRRVDNVPDFNYHTKQTRSNAVKQNFPETNVRTPEGVQNALQQNPRLHTYMQSLKVGGTGILLATGGYFLFSAATLVQDIINAINNTGGSYYVQGKNGGENADACLLLQRTCRQDPNLNQSDVAICPFDPLLPNNPPELTNMCQGFNYEVEKTVCRGSDPSADPDSPQYVDISDLPAGQTLMCIEPYSFGDLVGDLGLDWLLGDEGLVGKSSNVSDSVSGKLMPIILLIGAVLFLGLIFYFIYRYI | |||||||||||||||||||
1 | 1w5tB | 0.07 | 0.04 | 0.55 | 0.74 | DisCoVER | ---LARIYLRLL-AGLSDV---------------------------------------------------------NM-IYGSI--GR--VG-----I-----------------------------------GKTTLAKFTVKVSAAAKEGLTVKQAYVNAFNLILSLIVRQTILLNHYLLV---------ILDEFQS-MLRILYTLLRVHE------EIPSRDGVNRIGFLLVASLHLP-AYKSRELYTILHLELISDVYGEDKGGDG-SARRAIVALKMACEMA---------- | |||||||||||||
2 | 2bs3A | 0.09 | 0.06 | 0.71 | 0.67 | DEthreader | -----AAAQ--------G-GMQASL------DNEDLHFMDVK-CDQKVARMFVN------ATGHTLFAVA--G--TNAVVCE--GTGTAIALETIAQLG--NM----------------------EA--VQFHPTP-PSGILLTEGC----RGDGG-ILR--DVDGHRFM-PDYEPEKKELASRDVVSRRMIEHIRKGVQSPYGHLWLDIILVQEIYFAGIDPAEKW----APVLPMQHYSMGEAGGNSVSEAVVAGIVG-----RMMVALVAKGA--GAH-----M-IAPGYRYEV | |||||||||||||
3 | 5zizA | 0.05 | 0.05 | 0.96 | 0.61 | CEthreader | RALAAITRFGENANNVQNRLGLQENALAQAGDKMARVT-ELAVQSNNSSLSPDDRKAIASELTALRDSMVSLANSTDGTGRYLFAGTSDGNAPFIKSNGNVLYNGDQTQKQVEVAPDTFVSDTLPGSEIFMRIRTGDGSVDAHANATNTGTGLLLDFSRDASSGSWNG---------GSYSVQFTAADTYEVRDSTNAL--VSTGTYKDGEDINAAGVRMRISGAPAVGDSFQIGASGTKVFSTIDDMVAALNSDTQTPTQKAAMINTLQSSMRDIAQASSKMIDARASGGAQLSVI | |||||||||||||
4 | 4h63Q | 0.04 | 0.03 | 0.81 | 0.63 | EigenThreader | ALDMTSLLLSKFKENSI--ETI-------SPFLKSTVPPSSRS---------QPPESKESDATLAKCWKEKSLTSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLFNSQGSNHLSVQY------------SQAALKISILNKD-RDEIGSSTW----------------SWPSQNCNSVLLKDIYKLQEILFEMDIWNSLLQEAQSCG----NQGVS----DDHVVRITLETSSLCDTLNAIAHILFLKHCRKSDRRSQQDANAPLILRPLIFYYNLNQESLEFQRWLKQR | |||||||||||||
5 | 2pjpA | 0.08 | 0.02 | 0.26 | 0.29 | HHpred | ---------------------------------------------------------------EEQQAIWQKAEPLFG-DEPWWVRDLAKETGTDEAMRLTLRQAAQQGIITAIVKDRYYRNDRVEFANMIRDLDQECGST------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 5u1sA | 0.12 | 0.09 | 0.73 | 0.58 | MRFsearch | ---------------EADITSLTMFLYDKEFVKLEQSLVQLEKTFLPNLWKLHLGKYMPKNVINRVHNMWQKVMSQLEEPQKFDRIAAISKLKQMNHELSKISSLSSLTLTILSNISLITNFSLSIRVSAAQKDLMESNLNINVITIDITGNLLLSKLEPRR-----------------------------------------------------------------KRRTHLRLPLKRMQQLLNNIENSWFNGVQGFFSPEPAMFIKVEDWVIELFLKLNFLSKMEDLIYFVLDIL | |||||||||||||
7 | 6em5n | 0.10 | 0.09 | 0.93 | 0.53 | FFAS-3D | GIYPREPRNKKAPTTFYYAKDIQYLMHEPVLAKFREH-----KTFARKLTRALGRGE---------VSSAKRLEENRDSYTLD-----HIIKERYPSFPDAIRDIDDALNMLFLFSNLPSTNQVSKIINDAQKICNQIKGVYYQANIKGEE--VRWLVPFKFPENIPSDVDFRIMLTFLEFYSTLLHFVLYKLYTDSGLIYPPKLDISGLSSYILESRYDSPVASLFSAFVFYVSREVPLEFLILSCGGNVISEAAMIVDRPVLKNKVAGRTYIQPQWIFDCINLVPANKYLPGEAL | |||||||||||||
8 | 5wtjA | 0.13 | 0.12 | 0.93 | 0.55 | SPARKS-K | NENKFQEIYYPKNELYIYKKNLFLNIGNPNFDKIYGLISNIRKNKISEIDAILKNLNDKLNGYKEYKEKYIKKLKENDDFFAKNYKSFEKDYNRVSEYKKIRDLVENKIESYLIDINWKLAIQARFERDHYIVNGLRELGIIKLSGYNTG--------ISRAYPKRNG-SDGFYTTTAYYKFFDEESKKFEKICYGFGIDSENS--EINKP--ENESSHFYIVRNPFADYSIAYSTRYNVFEVFKDVNLDYLIGNNDILERLKPKKVSVLESYNSDYIKNLIIELLTKIE------- | |||||||||||||
9 | 1ce8A | 0.07 | 0.05 | 0.75 | 0.68 | CNFpred | ----------------IHWEVVRKIIEKERPDAVLPTM--GGQTALNCALELERQGVLEEFGVTMIGATADAIDKAE------DRRRFDVAMKK-EEALAVAADVGFPCIIRPSFTGGGIAYNREEFEEICARGLDLSKELLIDESLIGWKEYEMEVVRDKN--------DNCIIVCSIEN---------------------------------------FDAMGIHTGDSITVAP-NASMAVLREIGVETGGSNVQFAVNPRLIVIEMNSRSSALASKATGFPIAKVAAKLAVGYT | |||||||||||||
10 | 4fweA | 0.06 | 0.04 | 0.66 | 0.67 | DEthreader | ALCVREDEEFPEQEEILMTINTGLSVGADQY-LLPK----D---YHNK-SVLHIKVTVLEA--RIGWDIQLKSP-TT-------L-ALLQKG-AIQFNPP--LS-EKKMK------------AINS--LG-AG---IIEKIALQFPYR---FWD-K--------------GADFFGHVP------PSASKRGLGEAVASVRTLDDQVLQMAT-------------VPDPTKYFVTRWSTDPWIQMAY----D--TVFFAGEATNRHFPGLSGVREASKIA-AF-------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |