>PF04629 (257 residues) PYEFTMLKSLQDPVNKLTEKAEKEDLEIESTKSVQDQHSQLISLDEESHAKESNYSADDS KDVISTLQGSCNHKQNSGAIDHLLDLQPEENASKDQFVRSLESEPGDKDDMVLLNEILNA SSLDEGEFSKEWTAVFGQVALADLTMNSSAGDMESTSSSVAPTPSGYLPSQLLDQNMNDL QSSLHGWAANSVSPLSIPQPAQKPNSLNVNANKTPVKEPMKNPKDLTAWFSLFADLDPLS NPDAVGKTDKEHELLNA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | PYEFTMLKSLQDPVNKLTEKAEKEDLEIESTKSVQDQHSQLISLDEESHAKESNYSADDSKDVISTLQGSCNHKQNSGAIDHLLDLQPEENASKDQFVRSLESEPGDKDDMVLLNEILNASSLDEGEFSKEWTAVFGQVALADLTMNSSAGDMESTSSSVAPTPSGYLPSQLLDQNMNDLQSSLHGWAANSVSPLSIPQPAQKPNSLNVNANKTPVKEPMKNPKDLTAWFSLFADLDPLSNPDAVGKTDKEHELLNA | |||||||||||||||||||
1 | 2ftyA | 0.06 | 0.05 | 0.88 | 0.74 | DisCoVER | GKVTPGG-IDAHVHVLLG--DV--V--DTMEHATRSAVAGGTTTVVAFSTQDVSKGPSALAESVKLDVQTLYCDYGLHLI--LFQIELLDVQLQAAYDYGVVSSPQAAEVIYAETCPQLSSISESKYICSIV--GS--DHCS-YNYYEKTSTASKHRAPNGLPGVCTRMPLLYVIQCTNPAKVYGMYPQKGSISDADLVLIT-NKLMEHNCDYTPFEGIE------------IK-NWPRYTI-VKGKIVYKEGEIL- | |||||||||||||
2 | 3c9fB | 0.05 | 0.04 | 0.79 | 0.67 | DEthreader | ------DTHGWYSGANWGDFISFTTHMRRIAHQDL-LLIDSGDRHDDPNGLKSTPWENSKQEYETVVNH---FQ-DKYVCSNVD-IRLGLFLKRFNTRVTPMAEGEFYQFGGHSH----------------R--ETYIDFNDSFYHTNL---DKEFDTG---------------YYVDYVKSIFNLLAILTIINGSIRYDLYKGPYTIDSKFISPFENIWALNDISASRKPHQYDLQVVNF--PVPN----VI-QSV | |||||||||||||
3 | 4ayoA | 0.06 | 0.06 | 1.00 | 0.57 | CEthreader | LSEFGVLSQLTGERKYFDMAKRAMRHTLDRRSKIGLMAANIHAMTGAFTSRNASIDVYADSFYEYLWDAWALFGDEDCKRWAVECVDAQLAHQPMVDFETGAVTGTAQSELAAYYAGLLGQVGRKAQGDDYLASFTYLQATFGVIPESIDVTTGQPRRKHTGLRPEYPDACLNLWLIDRDPRYRRLAAIHYREMKATSRAAFGYTALKDITTRPMTQDDNCPGYWWSEQMKYYYLLTPRIDYGQLQLSTEANVLRGF | |||||||||||||
4 | 7a23I | 0.07 | 0.07 | 0.99 | 0.62 | EigenThreader | FEFIVLILLSTCGMLFMISAMYLAIELQSLCFYVIAASKRK---SEFSTEAGLKYLILGAFSSGILLFGCSMIYGSTGGILFIAVGFLFKITHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGIFFFCSIASMILGALATKVKRLLAYSSIGHVGYICIGFSCSLLIGIFIYALMTMDAFAIVLALRQTRVKYIADLGALAKTNFSYAGIPPLAGFCSKFYLFFAALGCGAYFLALVGVVTSVIGCFYYI | |||||||||||||
5 | 2y9yB | 0.18 | 0.09 | 0.53 | 0.38 | HHpred | ---------------------------------------------------------------------------------------------------------SKKVFSNPLYRLRLV--AREWGYPREWRQQLPSDQDISKPTTPVVDPPETWNAELPLESNPLYNREMDKNGILALK-PLTDWCASHSSAHDPTQQVPREGVDNQRSKKKHLKNAVKSFSLYDKWVPLFED-QPLANPFSE------------ | |||||||||||||
6 | 4rwtD | 0.09 | 0.06 | 0.67 | 0.55 | MRFsearch | -------------EDALDKIKSNDP------------DTTEVNLNNI---------ENITTQTLTRFAEALKDDSAAMAIAEMLKV-------------------ITGKGILAIMRALQHTELRRHIMGSQVEMEIV---------------------------------KLLKENTTLLRLGYHEGYDPPPPPPPPLPEKKLSAQRALQNGQGSGSGGSVGSQPNSILKEIKNSLRSVQEKKMEPQRSAHENLMEA | |||||||||||||
7 | 6xr4A1 | 0.09 | 0.08 | 0.88 | 0.43 | FFAS-3D | PDCYVELEKIILSERKIDRKRLLQLVRENQLQLDENELPHAVFQDPALQLSDLYFVEPKWLCKIMAQILTVKVEGCP--------KHPKGIISRRDVEKFLSKKRKFPKNYMS--------------------QYFKLLEKFQIALPIGEEYLLVGIKTSEGTPGFRAPEVARGNVIYNQQADVYSFGLTTGGRIVEGLKFPNEFDELEIQGKLPDPVKEYGCAPWPMVEKLIKQCNPQERPTS----AQVFDILNS | |||||||||||||
8 | 5mqfM | 0.07 | 0.07 | 0.93 | 1.12 | SPARKS-K | AEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNDAIIRGGLTRFTDQLGKCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLL--------LNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDP------FKATGKPHTLWVAFAKFYEDNGQ-----LDDARVILEKA | |||||||||||||
9 | 2h4mA | 0.14 | 0.09 | 0.65 | 0.60 | CNFpred | -------------------------------------------------------------DAIGTLADSVGHHLKPEYIQMLMPP------LIQKWNMLKDEDKDLFPLLECLSSVATAL---QSGFLPYCEPVYQRCVVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEV-----------------RQSSFALLGDLTKA-CFQHVK---CIADFMPI | |||||||||||||
10 | 6sytA | 0.04 | 0.03 | 0.72 | 0.67 | DEthreader | -----SL-NVDNAFVVIFDLSALTTIGNANVFHFSSKKHSILFSLPHLPDDLLQRDVVLSNNN--I-LAGQPAVTALCELHECS---------MKKLLPNMLSPDRELQKSIEVQLLSCSSALNTVRYQNQLLE---KI-------------------------------------TRLLAQCSFLIEKTKALSILSVSWTFKLNAATLLWIIPQSRIYNVCFEKGKSPEKVP------------Y-VSVWKRVKKL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |