Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MDPPNSLQQGIRFGFHSSSFVENMEGSQDEDNLRLLASAASGSSRDTETPTDHASGSAGGAAGGQSES |
1 | 2pffB | 0.19 | 0.10 | 0.54 | 1.38 | MRFsearch | | -------------------------------GVRVIVAGTGGGGGGGGGGGGGGGGGGGGGGGGGGQG |
2 | 3bogA | 0.14 | 0.13 | 0.94 | 1.68 | SPARKS-K | | TAGAAGSVGG--PGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGGKGGSGTPKGADGAPGAP-- |
3 | 6w1cE2 | 0.14 | 0.10 | 0.72 | 0.77 | DisCoVER | | -------EALVRSGKREATLSLH------PIHPTLLSYRTFGIPVPVEGVEY-QWGNPQRFVV----- |
4 | 6eemA | 0.05 | 0.04 | 0.96 | 0.83 | DEthreader | | KYTIILTHWQSP-NYFAY-FPSYKWFFLTLRSHVKMAKHFQIGMDRFEIVVPRTFAMVC-FRLNNTHA |
5 | 6w1cE | 0.10 | 0.10 | 1.00 | 0.74 | CEthreader | | LKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECTKCPPGERISVSFVDSKNEHRT |
6 | 2v36A | 0.09 | 0.09 | 1.00 | 0.58 | EigenThreader | | VDVGKDGMVATAHPLASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGGGVPGTLKGLEEAL |
7 | 3m8lA2 | 0.13 | 0.06 | 0.44 | 0.23 | HHpred | | GVATDYIVPGIPDGWPDTTIPNELIPAGDY-------------------------------------- |
8 | 2pffA | 0.19 | 0.09 | 0.46 | 0.87 | MRFsearch | | -------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
9 | 6ymxd | 0.15 | 0.13 | 0.90 | 0.22 | FFAS-3D | | LAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDP------- |
10 | 3boiA | 0.06 | 0.06 | 0.99 | 1.64 | SPARKS-K | | CPGTAGAAGSGGPGCDGGHGGNGGNGNPGCAGGV-GGAGGASGGTGVGGRGGKGGSGTPKGADGAPGA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|