>PF04617 (183 residues) MSTSGTLSNYYVDSFLLHESEELVPARYGPGALAQPARQPALGEHPDFSPCSFQSKASVF GTSWNPVHPPSANNVPAVYHPYVHHQAPVAAAPDGRYMRSWLEPMPGSLSFPGLPSSRHY GIKPEPLSARRGDCTTFDTHTLSLSDYACGSPPVDRDKQPSEGAFSENNGDSEASGDKPP IDP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MSTSGTLSNYYVDSFLLHESEELVPARYGPGALAQPARQPALGEHPDFSPCSFQSKASVFGTSWNPVHPPSANNVPAVYHPYVHHQAPVAAAPDGRYMRSWLEPMPGSLSFPGLPSSRHYGIKPEPLSARRGDCTTFDTHTLSLSDYACGSPPVDRDKQPSEGAFSENNGDSEASGDKPPIDP | |||||||||||||||||||
1 | 7cn9A1 | 0.09 | 0.08 | 0.87 | 0.62 | DisCoVER | AYTNSFTRGVYYPDKLFLPFFSNVTWFHAIHVSGTNGTK------RFDNP--VLPFNDGVYFAFGQSLLIVNNATNVVIKVCEFQFCEFRVYSSACTFEYVSEFVFKIYSKHTPILPSALEPLVTALHRSYLTPGDSSTAGAAAYYVGYLQPR----------TF---LLKYNENGTITDA-- | |||||||||||||
2 | 3emyA2 | 0.07 | 0.07 | 0.93 | 0.46 | CEthreader | HPSDSADSEYITSVSIGTPAQVLPLDDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDVYTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASSLAEPLFTADLRHGQNGSYNFGYIDTSVA------------ | |||||||||||||
3 | 1qz2A | 0.05 | 0.05 | 1.00 | 0.48 | EigenThreader | YAKPNEGARELRFEIGEGENLDLPYGLERAIQRMEKGEPSYAFGSVGKEKFQIPEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSLRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLA | |||||||||||||
4 | 6tgbA1 | 0.12 | 0.07 | 0.56 | 0.26 | HHpred | -----------------------------------------------------------------------------IYITLLQGDFDKYNKTTQRNVEVIMCVCAEDGKTLPNAICVGAGDKPMNEKQPRWETVAVPIRIHLRFMFRHRSSLESKDKGEKNFAMSYVKLM---KEDGTTLH- | |||||||||||||
5 | 2pffB | 0.10 | 0.07 | 0.63 | 1.48 | MRFsearch | ---------------------DDYGFKQGGGGGGGGGGGGGGGGG----------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------- | |||||||||||||
6 | 2ftcC | 0.12 | 0.12 | 0.99 | 0.45 | FFAS-3D | WTKDGQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVFNITDNAAIKPGTPLYAAHFRPYVDVTAKTIGKGFQGVMKRWGQPATHGQTKTHRRPGAVATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNIIYVNGSVPGHKNC--LVKVKDSKLP | |||||||||||||
7 | 4k0mC | 0.09 | 0.08 | 0.89 | 0.94 | SPARKS-K | ---KVYTIDEAARTAKFDETVEVHAKLGIQNVRGTVSLPHGLGKQVRVLAIAKKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAA-----AAAAAAAAAAAAAAAAAAAAA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------- | |||||||||||||
8 | 5vf4A | 0.11 | 0.02 | 0.21 | 0.18 | CNFpred | ----------------------------------------------------------IRGGDWGNGG------VAGLAALYLLNPRGSRR----WGVGARPAFVL----------------------------------------------------------------------------- | |||||||||||||
9 | 2vz8B | 0.05 | 0.04 | 0.79 | 0.67 | DEthreader | ---------------AG--MSGKLEEFWANLIG-M-KLKDLPQRMLVTYINPAFF--QAS--RTLAVQLLEQRHFVMLNAYLGL-VVVEILLCTAGVSVNPNGFPPVEFPAPRGTPLISPHIKWDHSQA-WDVPSAD--K-DLPKT---------PALNTQPVM-FRHFPLERFSQPHLSSFV | |||||||||||||
10 | 2nbiA | 0.12 | 0.12 | 0.99 | 0.78 | MUSTER | SECADVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDPDCDVLPFPNNLGCPACCPFEC-SPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |