>PF04610 (218 residues) IVIDITLAGLFWAWGADEDILQRLVKKTLYIGFFAFIITNFTKLSGIIFNSFAGLGLKAG GSSISTADFLRPGRLAQVGLDAGQPLLDSASQMMGFTSFFSNFVQIAVLMVSWLLVLIAF FILAVQLFVTLIEFKLTTLAGFILIPFALFNKTAFLAEKVLGNVVASGVKVMVLAVIVGI GTGLFSQFTTAYAGGQPTIEQALSVVLAALAMLGLGIF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | IVIDITLAGLFWAWGADEDILQRLVKKTLYIGFFAFIITNFTKLSGIIFNSFAGLGLKAGGSSISTADFLRPGRLAQVGLDAGQPLLDSASQMMGFTSFFSNFVQIAVLMVSWLLVLIAFFILAVQLFVTLIEFKLTTLAGFILIPFALFNKTAFLAEKVLGNVVASGVKVMVLAVIVGIGTGLFSQFTTAYAGGQPTIEQALSVVLAALAMLGLGIF | |||||||||||||||||||
1 | 7anzC | 0.07 | 0.07 | 0.94 | 1.00 | DEthreader | -KWNELFL--IK-IDGLFQN-STIQSK-LNTY-NMLLFFVVNIFQRLFLF---ESLYKVEPTSVDLFKLLIIKFISKYNSSNWQEMNYSKIWTNSHFNSSVKK-WILRCRVLHSRICSFIHELENYIVHVIEHNFEEIKNLIHTTLISTVE--Q-LIQKFLDYSSTLLNDSLLTSLQLRKMLDFIFHFNNYIQVVNLSFLMQYEKFGENLVTFLTILS | |||||||||||||
2 | 3vvnA1 | 0.10 | 0.09 | 0.93 | 1.07 | FFAS-3D | ---------------KTTKGVQDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMG-AEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEANRAMLAMVLGSGLNIVLDPIFIYTLGFGVVGAAYATLLSMVVTSLFIAY | |||||||||||||
3 | 3rkoC | 0.08 | 0.08 | 0.99 | 1.06 | CNFpred | MVVLTGLLGVLAVLC-YQGFFHLNLMWILGGVIGVFLAIDMFLFFEMMLVPMYFLIALWGHKATRITAATKFFIYTQASGLVMLIAILALVFVHWTFNYE-LMLGFFIAFAVKMPVWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMATSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLF | |||||||||||||
4 | 4e40A | 0.08 | 0.06 | 0.78 | 1.00 | DEthreader | GEI--KVEL--E-------DSDDVAAACELRAQL-AGV--S-IASGILLR-PAV-----------I-RNATTEFSRKKSEDILAKGGAAVERAAADRVSVRKAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGASAKVEKTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEE-------------------- | |||||||||||||
5 | 3ripA | 0.07 | 0.06 | 0.86 | 1.00 | DEthreader | -WGLLLDEEFFRVEILPSYI-PVRVAEKILFVGESMLMWPLHILFTPVLEKYNV-VF------KY---LL---SVRRVQAELQHCWALQMQRHLK-SNQ-TDAIKWRLRNHMAFLVDNLQYYLQVVLESQFSQL-LHQINS-TRDF----------ES-IRLAHDHFLSNLLAQSFLLKPVFHCLNEILDLCHSSLLLVKGFSRQSSLLFKILSSVRN | |||||||||||||
6 | 6idpA1 | 0.09 | 0.08 | 0.89 | 1.06 | FFAS-3D | -----------------QTSTSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQVLPLAAQGFTM-------PIQMVIIGIQVGLGIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANTLLPGTLMMVTSVLNLILDPIFIFTFDLGIDGAAIATIIAFGVGIAIVAP | |||||||||||||
7 | 3rkoB | 0.10 | 0.10 | 0.99 | 1.04 | CNFpred | VGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFR-MLMWATLMLLGGAVGKSATWLADAMAGPTPVSALIHAATMVTAGVYLITHGLFLMTPEVLHLVGIVGAVTLLLAGFAASTMSQIGYMFLALG--VQAWDAAIFHLMTHAFFKALLFL | |||||||||||||
8 | 6g9xA1 | 0.09 | 0.05 | 0.56 | 0.70 | DisCoVER | PLLLGL-----------------------------------------LG--STTCGMLLYVFTFPAGRLSGPRKVVMTGGVLL---------------------AIGFILSGGVIAGFGGGMIY--LPPIATAPKWW-----------------------PDRRALATGFAVVGLGLGSFLMGPL--ATYII---EWRY-VFWYCGVAMGIMALIAG- | |||||||||||||
9 | 4e40A | 0.08 | 0.06 | 0.73 | 1.00 | DEthreader | ----------------DSDDVA---AACELRAQLAGVS-IA--SG-ILLRPA-------------VI-RNATEFSRKKSEDILAKGGAAVERASAVVKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAKVKTFQSILTSLDNLDKDVKSVEQRAEELETALEKAE-RQLEKAEKAA--------------------- | |||||||||||||
10 | 3mktA2 | 0.05 | 0.05 | 0.84 | 0.52 | CEthreader | ----AALFFEVTLFAVVALLVAPLSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGKGAAIAANVGLMTGLATACITALLTVLFREQIALLENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKD-------------------------------MTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPAKGFWLGFIIGLSAAALMLG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |