>PF04583 (220 residues) FIVMLVKNPEIWKFLAEGWIFNASLSKIKELCLKVIEVSQNPLMRDLPKLLDMAFSKNVL SAGLRSVTRSIVVNSALRSAGTITLMVAKLTAEITSVVGWLVAAITVFDFIFAIWDPYGY NNMFPANYAKDFMRASEIALRTQFKTPSVQYDYDQLLQMLISHDEFVQVTVESLLDRVVY LDALDVNSDGETIYKSELLYINKDNTNIKRSHPFENDTSC |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FIVMLVKNPEIWKFLAEGWIFNASLSKIKELCLKVIEVSQNPLMRDLPKLLDMAFSKNVLSAGLRSVTRSIVVNSALRSAGTITLMVAKLTAEITSVVGWLVAAITVFDFIFAIWDPYGYNNMFPANYAKDFMRASEIALRTQFKTPSVQYDYDQLLQMLISHDEFVQVTVESLLDRVVYLDALDVNSDGETIYKSELLYINKDNTNIKRSHPFENDTSC | |||||||||||||||||||
1 | 1b3uA1 | 0.07 | 0.03 | 0.47 | 0.71 | DisCoVER | -DEVLLAL--AEQ-LG-TFTTLVG----------------------------------------------------------------------------PEYVHCLLPPLES-LATVEETVVRDK-A-------V----------ESLRA-I--SH--E--------HSPSDLEHFVPLVKRLAFTSRTSACGLFSYFRL--CSDDTPMVRRAAASKL- | |||||||||||||
2 | 2c9kA | 0.12 | 0.09 | 0.73 | 0.83 | DEthreader | ----F--TTPLGL-ALIGFGTIPVLFPASNTWSDFITQTKNIIK--KE---I--A-STYISNANKILNRSFNVISTYHHVTQIQLVHY-HFQNVIPLLSYAQAANLHL-T----------------------N--Q---KF---AYLDYYPVLTKAIEDYTNYCVTTYKKGLRKMTTAVDL---ELT-TWNYIFLLFFI------TNGTR--LLEKELTK | |||||||||||||
3 | 3jacA | 0.03 | 0.03 | 0.99 | 0.52 | CEthreader | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 6xbdG | 0.05 | 0.05 | 0.86 | 0.55 | EigenThreader | NALASLGHKGIKT----------------LRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVL----SMLIIVVSGVFIGMVLGLQGYLVLTTSLGMLVALSLLRELGPVVAALLFAGRLLTVIFVAVGIWGGSLVGV----SWKGIDSGFFWSAM----QNAVDWRMDLVNCLIKSVVFAI---TVTWISLFNGYDAIPTSAGISRATTRTVVHS | |||||||||||||
5 | 5uot0 | 0.08 | 0.06 | 0.75 | 0.36 | HHpred | -EITFFQTHPYFRVLLEEATVPRLAERLTTELIMHIQKSLPLLEGQIRESHQKATELRRCGADIPSQEADK-MFFLIEKIKMFNQDIEKLVEGETRLYNKIREDF--KNWVGIL-ATNT--QK----VKNIIHEEVEKYEKQYRGKELLFVNYKTFEIIVHQYVEPALSMLQKAME-------------------------------------------- | |||||||||||||
6 | 6fgzA | 0.10 | 0.08 | 0.79 | 0.38 | MRFsearch | --IRFFRSHPVYRRLLPQLGTNTLARTLSTLLMKHIRDTLPSIRQKMSQQLAEWSCVDLVYDELVRLALNCETELLSEILACAQNLLRELKQPCLEMVQNLIDIELIQTLLASYFD------VVRVNMMDMVPKAIMSFLVLRARDRADLYKPERMSELLNESSDVAERMVDLLQRGMAVIN-------------------------------------- | |||||||||||||
7 | 6m6zA | 0.12 | 0.10 | 0.82 | 0.92 | FFAS-3D | LIQLVIAFVFLILLILLSWRSEELIRELEEKGAASEAELARMKQQHMTAYLQAALTAEIISKSVIALLLLQQNQLNLELNKNVAEELLRRSREYLKKVALIQLVIAFVFLILLI-------------LLSWRSEELIRELEEK-GAASEAELARMKQQHMTAYLQAALTAWEIISKSVIALLLLQQNQ-----------------LNLELRH-------- | |||||||||||||
8 | 6w2rA | 0.13 | 0.11 | 0.84 | 0.76 | SPARKS-K | TTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESALDVALRVAQEAAKDEAAEVVVRIAEESDALEQALRVLEEIAKAVLKSEKDAKKAVKLVQEAYKAAQRAIEAAKRTGTPIKLAIKLAKLAARAALEVIKEVNEAKKIVKAIQEAVESLREAEEKREKARERVREAVERAEEV------------------------------------ | |||||||||||||
9 | 6vfkB | 0.09 | 0.07 | 0.80 | 0.76 | CNFpred | MIDILAESKKSIEELARAAAVAEAIEEIARLATAAIQLIEALAK-ASEEFMARAIIAELAKKAIEAIYRLAFMARAIAAIANLAVTAILAIAALAAISAIAELAKKAIEAIYRLADNHTTDKFMAIEAIALLATLAILAIALLAS---NHTTEKFMARAIMAIAILAAKAIEAIYRLADNH--------------------------------------- | |||||||||||||
10 | 4mycA | 0.10 | 0.07 | 0.71 | 0.83 | DEthreader | --TVALPAAIGLTILCYGVARFGSVLFGELRNAVFAKVAQNAIRTVSLQTFQHLTLTRAMDRGTKGISQVLTAMVHIIPISFEISVVCGILTYQ---FGASFAAITFSTMLLYSITIKTTLFLNSQNLIFTTALTAMMYMGCTVIG-TVGDL--L---L----------------------------E-----------------------RKNEVKI-- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |