Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | FIVMLVKNPEIWKFLAEGWIFNASLSKIKELCLKVIEVSQNPLMRDLPKLLDMAFSKNVLSAGLRSVTRSIVVNSALRSAGTITLMVAKLTAEITSVVGWLVAAITVFDFIFAIWDPYGYNNMFPANYAKDFMRASEIALRTQFKTPSVQYDYDQLLQMLISHDEFVQVTVESLLDRVVYLDALDVNSDGETIYKSELLYINKDNTNIKRSHPFENDTSC |
1 | 1b3uA1 | 0.07 | 0.03 | 0.47 | 0.71 | DisCoVER | | -DEVLLAL--AEQ-LG-TFTTLVG----------------------------------------------------------------------------PEYVHCLLPPLES-LATVEETVVRDK-A-------V----------ESLRA-I--SH--E--------HSPSDLEHFVPLVKRLAFTSRTSACGLFSYFRL--CSDDTPMVRRAAASKL- |
2 | 2c9kA | 0.12 | 0.09 | 0.73 | 0.83 | DEthreader | | ----F--TTPLGL-ALIGFGTIPVLFPASNTWSDFITQTKNIIK--KE---I--A-STYISNANKILNRSFNVISTYHHVTQIQLVHY-HFQNVIPLLSYAQAANLHL-T----------------------N--Q---KF---AYLDYYPVLTKAIEDYTNYCVTTYKKGLRKMTTAVDL---ELT-TWNYIFLLFFI------TNGTR--LLEKELTK |
3 | 3jacA | 0.03 | 0.03 | 0.99 | 0.52 | CEthreader | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6xbdG | 0.05 | 0.05 | 0.86 | 0.55 | EigenThreader | | NALASLGHKGIKT----------------LRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVL----SMLIIVVSGVFIGMVLGLQGYLVLTTSLGMLVALSLLRELGPVVAALLFAGRLLTVIFVAVGIWGGSLVGV----SWKGIDSGFFWSAM----QNAVDWRMDLVNCLIKSVVFAI---TVTWISLFNGYDAIPTSAGISRATTRTVVHS |
5 | 5uot0 | 0.08 | 0.06 | 0.75 | 0.36 | HHpred | | -EITFFQTHPYFRVLLEEATVPRLAERLTTELIMHIQKSLPLLEGQIRESHQKATELRRCGADIPSQEADK-MFFLIEKIKMFNQDIEKLVEGETRLYNKIREDF--KNWVGIL-ATNT--QK----VKNIIHEEVEKYEKQYRGKELLFVNYKTFEIIVHQYVEPALSMLQKAME-------------------------------------------- |
6 | 6fgzA | 0.10 | 0.08 | 0.79 | 0.38 | MRFsearch | | --IRFFRSHPVYRRLLPQLGTNTLARTLSTLLMKHIRDTLPSIRQKMSQQLAEWSCVDLVYDELVRLALNCETELLSEILACAQNLLRELKQPCLEMVQNLIDIELIQTLLASYFD------VVRVNMMDMVPKAIMSFLVLRARDRADLYKPERMSELLNESSDVAERMVDLLQRGMAVIN-------------------------------------- |
7 | 6m6zA | 0.12 | 0.10 | 0.82 | 0.92 | FFAS-3D | | LIQLVIAFVFLILLILLSWRSEELIRELEEKGAASEAELARMKQQHMTAYLQAALTAEIISKSVIALLLLQQNQLNLELNKNVAEELLRRSREYLKKVALIQLVIAFVFLILLI-------------LLSWRSEELIRELEEK-GAASEAELARMKQQHMTAYLQAALTAWEIISKSVIALLLLQQNQ-----------------LNLELRH-------- |
8 | 6w2rA | 0.13 | 0.11 | 0.84 | 0.76 | SPARKS-K | | TTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESALDVALRVAQEAAKDEAAEVVVRIAEESDALEQALRVLEEIAKAVLKSEKDAKKAVKLVQEAYKAAQRAIEAAKRTGTPIKLAIKLAKLAARAALEVIKEVNEAKKIVKAIQEAVESLREAEEKREKARERVREAVERAEEV------------------------------------ |
9 | 6vfkB | 0.09 | 0.07 | 0.80 | 0.76 | CNFpred | | MIDILAESKKSIEELARAAAVAEAIEEIARLATAAIQLIEALAK-ASEEFMARAIIAELAKKAIEAIYRLAFMARAIAAIANLAVTAILAIAALAAISAIAELAKKAIEAIYRLADNHTTDKFMAIEAIALLATLAILAIALLAS---NHTTEKFMARAIMAIAILAAKAIEAIYRLADNH--------------------------------------- |
10 | 4mycA | 0.10 | 0.07 | 0.71 | 0.83 | DEthreader | | --TVALPAAIGLTILCYGVARFGSVLFGELRNAVFAKVAQNAIRTVSLQTFQHLTLTRAMDRGTKGISQVLTAMVHIIPISFEISVVCGILTYQ---FGASFAAITFSTMLLYSITIKTTLFLNSQNLIFTTALTAMMYMGCTVIG-TVGDL--L---L----------------------------E-----------------------RKNEVKI-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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