Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | NVYFHWMVDVLPRLELLRQSGINFDQIDWFLVNSYQAPFQRETLTRLGIPEFKILESDQFPHIQAQQLIVPSFAGHTGWLQPWAIDTLRRWFLPKSSNSGKNYPERIYISRGDASYRRVLNEDEVIQFLRPWGFVTVQLETLSFTEQVALFAEAKVIMGAHGSGLTNILFCQPGTQVIEFMSPHYNRHYYWVISQYLGLEHYCLTG |
1 | 3tovA | 0.08 | 0.07 | 0.90 | 1.17 | DEthreader | | -HLGDVIL-TTPFLEVLRKAAPHSH-I-TYVI---DEKL-QQV-EYNIDELIVVVATSYLAWIHAITTGTRLDRKTRHAADSNSGL-H--IEICEEWRCQDTDILIGFNIGS-AVPEKRWPAERFAHVADYFGTVFFGGPGFQLGPLAAA-NRCNLLITNDSGP-HVGISQG--VPIVALYGPSNPFFYGP-Y--QA-HAIVLELS |
2 | 6vlbA | 0.08 | 0.08 | 0.93 | 1.17 | DEthreader | | ----TRP-EAIKMAPVILELQKHNITSKVCITAQHREM-LDQVLSLFEIKADYDLNIMKINISDVFKPVLVHIEAGLRAPTGNTVIDALMVSLEKLKKKEIQDSKVILITAH-RRENHGIKIGLSILELAKYFSFVIPLHPQEYLPFVYLMSKSHIILS-DSGGIQ-EEAPSLGKPVLVLR-D--TTER-PEAVAA--GTVKLVGE |
3 | 2gt1A | 0.09 | 0.08 | 0.92 | 1.17 | DEthreader | | SSMGDVLH-TLPALTDAQQAIPGIK-F-DW-VV--EEGFA-QIPSWHAVERVIALQSALVTRAHGVKHGM-ARAKQQHAVETQGDYAIA-QHFL-TNLPTDAGEYAVFLHAT-TRDDKHWPEEHWRELIGLLAIKLPWGAKMSLEGVARVLAGAKFVVSVDTGLSHLTAALD--RPNITVYGPTDPGLIGG-YGK---NQMVCRAL |
4 | 2gt1A | 0.08 | 0.08 | 0.92 | 1.17 | DEthreader | | SSMGDVLHT-LPALTDAQQAIPGIK-F--DWV--VEEGF-AQIPSWHAVERVIALQSALVTRLAHGVKHGMHHIKQQHAVEQTQGDYAIAQ-HFLTNLPTDAGEYAVFLHAT-TRDDKHWP-EEHWRELIGLARIKLPWGKMSLEGVARVLAGAKFVVSVDTGLSHTAALDR--P-NITVYG-PTDPGLIGGYGK--NQMVCRALQ |
5 | 3tovA | 0.09 | 0.08 | 0.89 | 0.71 | DisCoVER | | LHLGDVILT-TPFLEVLRK---AAPHSHITYVIDE--KLQ-QVE-YNPNI-DELIVVDKNAKGKTDIVINLHLDRHAADYITSNS-GLH-IEI-CWRQAQDTDILIGFNIG--SPEK-RWPAERFAHVADGYKTVFFGGDKFQLGPLAA-ANRCNLLITNDSGP-HVGISQG--VPIVALYGPSNPFFYG-PY--QAHAIVLELS- |
6 | 6vlbA | 0.08 | 0.07 | 0.90 | 1.17 | DEthreader | | -----TRPEAIKMAPVILELQKHNITSKVCITAQHREM-LDQVLSLFEIK-ADYDLNIMNISLVLPCVLVHGDEAGLRAPTGNTVIDALMVSLEKLKKEIQDSKVILITAH----RRENEGIKNIGLSILELAFVIPLHLPQEYLPFVYLMSKSHIILSDSGG-IQ-EEAPSLGKPVLVLRDT--TE--RPE-AV--AGTVKLVGS |
7 | 6frnA2 | 0.11 | 0.05 | 0.50 | 0.51 | CEthreader | | -----------------------------------------------------------------------------------------------------CKDKVTIVYDTMHGSTQKM-AHAFAEGIMSEGVKMYFLHNDERSEIVKDILDSKAFLLGAPSVGDLIYYLKLKRLALAFGSNGGGTKVLAEKLKECGFEVLDEYE |
8 | 4rapA | 0.12 | 0.11 | 0.90 | 0.58 | EigenThreader | | GTLGDLLGWFPYAERFQSLHKC------RLECTS--QDIIDLLAPQYPQI----QFSTPDKPRYRVGNNQPVDFRKVGFHRSAGYILGVDVRLDLSAPRVIAAPYVCIATQSTCQAKYWNNGSEVIAHLKSLGYRVCHIGKLPLQERVNLLRHASFFIGLPSGLSWLAWATRIPVVLISGFSLPNSEFY---------TPWRVFNS |
9 | 4a26A | 0.10 | 0.09 | 0.92 | 0.32 | HHpred | | -----IRSELKDKVAALRELGGRVPGLASIIVGQRMKKYVHKAAAEVGMAS-FNVELPEDIDPNCHGIIVPLPKHLAPPFTPCTAKGVIVLLKR-CG-IEMAGKRAVVLGRSNIVG------APVAALLMKENATVTIVHSGTTEDMIDYLRTADIVIAAMGQPYVKGEWIKEGAAVVDVGTTPVGDVCFEEAAARAAW-ISPV-- |
10 | 6yhrA | 0.15 | 0.12 | 0.83 | 0.48 | MRFsearch | | ---GHDFRDSFRKLGSLKTA---LPMVPIVALTAASSSIREDIVRCLNLRNPQITCTGFRPNLYLEVRRK----------TGNILQDLQPFLVKTSSHWEFEGPTIIYCPS-------RKMTQQVTGELRKLNLSCGTYHFSTRKDIHHRFVRIQCVIATIA-----------IRQVIHYGAPKDMESYYQEIGRAGQSSCHVLWA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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