Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | WSFQGGLTYLNDPNINNAPNAGTTYGNWTAPKKESAQGVGFHFEADKKWSWGNGFFHEFRLNGNGKYYWNNKKYNEYSLRESLGLGYQNAKQKITLLPFFEQMWYAGGSSQTESTKRYSNAGGVNARWQYWITPQWQSAISYEYAEQRYTRRQHLDGNYHFIAPSLYFYPNSRQYWFVGANFNRTSPRDLDDSFIRRGVSIGWGQEWKNGLSTQLSASYARKQYRAPMPIFQITQRNSEYGVQASIWHRALHFKGITPRLTWQYNKVKSNHSFYSYDKNRVYIEFSHTF |
1 | 4d51A | 0.08 | 0.07 | 0.94 | 1.33 | DEthreader | | GGHVGTSVEYEDKV--TRGFNN-------T-DKKEKTITNEVFNFFYNNP-Q--WNFMGFYSFKIENREQKENEDGIKQLFSLNKGHDLGGWATGLIYELEYTRSKVYSDVS-GLRKNLAEHSIRPYLTYWNNDNMGFYSNLEYLLSKEDRWGKRQEQGYSALFKPYKRFG-NWEVGVEFYYQIKTNDEEKSDFNERYIEPIVQYSFDDAGTLYTRVRVGKNETKNTSGGGNINYFKDIRKATVGYEQS-IGESWVAKA-EYEYANEVEKKNKSEL-TQHTFYAQALYR |
2 | 4d51A | 0.08 | 0.07 | 0.93 | 1.33 | DEthreader | | GHVGTSVEYEDKVT-RG-----------FNNTDKKEKTITNEFNFFYNNP--Q-WNFMGFYSFKIENREQYENEDGIKQLFSLNKGHDLGGWATGLIYELEYTRSKVYS---SGLRKNLAEHSIRPYLTYWNNDNMGFYSNLEYLLSKEDRWGKRQEQGYSALFKPYKRFG-NWEVGVEFYYQIKTNDEEKSDFNERYIEPIVQYSFDDAGTLYTRVRVGKNETKNTSGGNGINYFKDIRKATVGYEQSIG-ES-WVAKAEYEYANEVEKKNKSELTQHTFYAQALYRF |
3 | 2gskA | 0.07 | 0.07 | 0.96 | 1.03 | SPARKS-K | | TRVTLLGDYAHTHGYDVVAYGNTGTQAQ----TDNDGFLSKTLYGALEHNFTDAWSGFVRGYGYDNRTNSPGSPLLDTRKLYSQSWDAGLRYNGSYSHSKDYNYDPHYGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGVEDGYDQRNTGIYLTGLQQGDFTFEGAARSDDNS-----QFGRHGTWQTSAGWEFIEGYRFIASYGTSYKYGFYGNPNLDP---EKSKQWEGAFEGLTAGVNWRISGYRNDVSDYDDHTLKYYNEGKARIKGVEATA |
4 | 6r2qB | 0.09 | 0.09 | 0.98 | 1.31 | HHsearch | | WFTALNYNGSIFKNEYNSAFNPTFQTSGSIALDPDNQSH--TVSLMGQYNDS-TNVLSARLLTGQMSQDQALDAKVDLIGLNLKVVSKVNSLRLSGSYDYNDRDNNTQIEEWYNTPYDNTSQRFKVAADYRITRGMKLDGGYDFRRDERNYQDRETTDENTVWARFRVNSFETWDMWVKGSYGQRDGSEQAANRDRTQVEARVTHSPIESLTIDFGARYALDDYTDTV--IG-LTESKDTSYDANISYMITDDLLANAFYNYQIIESEQATPTIEDKVDVVGAGISYNI |
5 | 2wjqA | 0.11 | 0.07 | 0.69 | 1.08 | FFAS-3D | | ------------------------------------------ATLDVRGG-----------------YRSGSHAYETRLKVSEGW---QNGWWASMESNTWNT---------------INDVQVEVNYAIKLDDQWTVRPGMLTHFSS-------NGTRYGPYVKLSWDATKDLNFGIRYRYDQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRY----ANHKKWATENAFVLQYHMTP--DITPYIEYDYLDRQGVYNGDNLSENSYRIGVSFKL |
6 | 4d51A | 0.08 | 0.07 | 0.93 | 1.17 | DEthreader | | GGHVGTSVEY-EDK--VTRGFN--------TDKKEKTITNEVFNFFYNNPQ---WNFMGFYSFKIENREQKENEDGIKQLFSLNKGHDLGGWATGLIYELEYTRSKVYS-VSGLRKN-LAEHSIRPYLTYWNNDNMGFYSNLEYLLSKEDRWGKRQEQGYSALFKPYKR-FGNWEVGVEFYYQIKTNDEEKSDFNERYIEPIVQYSFDDAGTLYTRVRVGKNETKNTSGGGNINYFKDIRKATVG-YEQSIGESWVAKAEY-EYANEVEKKEKSELTQ-HTFYAQALYR |
7 | 3dwoX | 0.08 | 0.08 | 0.91 | 1.17 | DEthreader | | KRIAQLTVNY-ADI--DIKYNGDAYDMNDGGQAGFG-AWLPTGFLVVPIN--DR-FAFGLSQVV---------K-ETIGLTGSLSFKVNDNFSLGAGVIIQRTSGF---------KVDNTSPGFFAGAVWKPTDRDTLGFAYHAKIRNLKGASARLDIPAYASLDWVHQFNDRLSLGASATWTEWSFQDPYTYRNTWTLAVGGDYKVTDQWTMRAGVAYDQTPTHNATR-DPRIPDGDRYFASLGAGYRFQSMPELSIDAAYSRQFVKVPLGRATSKGQVFSLSATYDF |
8 | 3dwoX | 0.09 | 0.09 | 0.92 | 1.33 | DEthreader | | RIAQLTVNYADID--IKY---AYDYGNPMNDGGQAGFGAWLPTGFLVVPI-NDRFAFGLSQVVP-G-R-T---TKIETIGLTGSLSFKVNNFSLGAGVIIQRTSGF-S-------KVDNTSPGFFAGAVWKPTDRDTLGFAYHAKIRNLKGASARLDIPAYASLDWVHQFNDRLSLGASATWTEWSFQDPYTYRNTWTLAVGGDYKVTDQWTMRAGVAYDQTPTHNATRDP---PDGDRYFASLGAGYRFQSMPELSIDAAYSRQFVKEVPLRATSKGQVFSLSATYDF |
9 | 2jqyA | 0.10 | 0.09 | 0.90 | 1.31 | HHsearch | | WHFNIGAMYEIENVEGYGEDMDGLA------EP----SVYFNA--A-----NGP--WRIALAYYQEGPVDYSARGTWFDRPELEVHYQNDDFSFGLTGGFRNYGYHYVDEPG-KDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYK--FANDLNTTGYRVETETGLQYTFNETVALRVNY-YLERGFNMDNGEFSTQEIRAYLPLTL-GNHSVTPYTRIGLDRWSNWQDD-IEREGHDFNRVGLFYGYDFQNGLSVSLEYA--FEWQDHDE-GDSDKFHYAGVGVNYSF |
10 | 3dwoX | 0.07 | 0.06 | 0.89 | 1.17 | DEthreader | | RIAQLTVN-Y-ADI--DIKYN---------GGQAGFGAWLPTGFLVVPIN-D-R-FAFGLSQVVP-----T--KIETIGLTGSLSFKVNDNFSLGAGVIIQRTSGFVS-----VKVD-NTSPGFFAGAVWKPTDRDTLGFAYHAKIRNKLKASARLDIPAYASLDWVHQ-NDRLSLGASATWTEWSSFQDPTYRNTWTLAVGGDYKVTDQWTMRAGVAYDQTPTHNATR-DPRIPDGDRYFASLGAGYRFQMPELSIDAAYSRQFVKEVPLGRATSKG-QVFSLSATYD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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