>PF04575 (289 residues) WSFQGGLTYLNDPNINNAPNAGTTYGNWTAPKKESAQGVGFHFEADKKWSWGNGFFHEFR LNGNGKYYWNNKKYNEYSLRESLGLGYQNAKQKITLLPFFEQMWYAGGSSQTESTKRYSN AGGVNARWQYWITPQWQSAISYEYAEQRYTRRQHLDGNYHFIAPSLYFYPNSRQYWFVGA NFNRTSPRDLDDSFIRRGVSIGWGQEWKNGLSTQLSASYARKQYRAPMPIFQITQRNSEY GVQASIWHRALHFKGITPRLTWQYNKVKSNHSFYSYDKNRVYIEFSHTF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | WSFQGGLTYLNDPNINNAPNAGTTYGNWTAPKKESAQGVGFHFEADKKWSWGNGFFHEFRLNGNGKYYWNNKKYNEYSLRESLGLGYQNAKQKITLLPFFEQMWYAGGSSQTESTKRYSNAGGVNARWQYWITPQWQSAISYEYAEQRYTRRQHLDGNYHFIAPSLYFYPNSRQYWFVGANFNRTSPRDLDDSFIRRGVSIGWGQEWKNGLSTQLSASYARKQYRAPMPIFQITQRNSEYGVQASIWHRALHFKGITPRLTWQYNKVKSNHSFYSYDKNRVYIEFSHTF | |||||||||||||||||||
1 | 4d51A | 0.08 | 0.07 | 0.94 | 1.33 | DEthreader | GGHVGTSVEYEDKV--TRGFNN-------T-DKKEKTITNEVFNFFYNNP-Q--WNFMGFYSFKIENREQKENEDGIKQLFSLNKGHDLGGWATGLIYELEYTRSKVYSDVS-GLRKNLAEHSIRPYLTYWNNDNMGFYSNLEYLLSKEDRWGKRQEQGYSALFKPYKRFG-NWEVGVEFYYQIKTNDEEKSDFNERYIEPIVQYSFDDAGTLYTRVRVGKNETKNTSGGGNINYFKDIRKATVGYEQS-IGESWVAKA-EYEYANEVEKKNKSEL-TQHTFYAQALYR | |||||||||||||
2 | 4d51A | 0.08 | 0.07 | 0.93 | 1.33 | DEthreader | GHVGTSVEYEDKVT-RG-----------FNNTDKKEKTITNEFNFFYNNP--Q-WNFMGFYSFKIENREQYENEDGIKQLFSLNKGHDLGGWATGLIYELEYTRSKVYS---SGLRKNLAEHSIRPYLTYWNNDNMGFYSNLEYLLSKEDRWGKRQEQGYSALFKPYKRFG-NWEVGVEFYYQIKTNDEEKSDFNERYIEPIVQYSFDDAGTLYTRVRVGKNETKNTSGGNGINYFKDIRKATVGYEQSIG-ES-WVAKAEYEYANEVEKKNKSELTQHTFYAQALYRF | |||||||||||||
3 | 2gskA | 0.07 | 0.07 | 0.96 | 1.03 | SPARKS-K | TRVTLLGDYAHTHGYDVVAYGNTGTQAQ----TDNDGFLSKTLYGALEHNFTDAWSGFVRGYGYDNRTNSPGSPLLDTRKLYSQSWDAGLRYNGSYSHSKDYNYDPHYGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGVEDGYDQRNTGIYLTGLQQGDFTFEGAARSDDNS-----QFGRHGTWQTSAGWEFIEGYRFIASYGTSYKYGFYGNPNLDP---EKSKQWEGAFEGLTAGVNWRISGYRNDVSDYDDHTLKYYNEGKARIKGVEATA | |||||||||||||
4 | 6r2qB | 0.09 | 0.09 | 0.98 | 1.31 | HHsearch | WFTALNYNGSIFKNEYNSAFNPTFQTSGSIALDPDNQSH--TVSLMGQYNDS-TNVLSARLLTGQMSQDQALDAKVDLIGLNLKVVSKVNSLRLSGSYDYNDRDNNTQIEEWYNTPYDNTSQRFKVAADYRITRGMKLDGGYDFRRDERNYQDRETTDENTVWARFRVNSFETWDMWVKGSYGQRDGSEQAANRDRTQVEARVTHSPIESLTIDFGARYALDDYTDTV--IG-LTESKDTSYDANISYMITDDLLANAFYNYQIIESEQATPTIEDKVDVVGAGISYNI | |||||||||||||
5 | 2wjqA | 0.11 | 0.07 | 0.69 | 1.08 | FFAS-3D | ------------------------------------------ATLDVRGG-----------------YRSGSHAYETRLKVSEGW---QNGWWASMESNTWNT---------------INDVQVEVNYAIKLDDQWTVRPGMLTHFSS-------NGTRYGPYVKLSWDATKDLNFGIRYRYDQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRY----ANHKKWATENAFVLQYHMTP--DITPYIEYDYLDRQGVYNGDNLSENSYRIGVSFKL | |||||||||||||
6 | 4d51A | 0.08 | 0.07 | 0.93 | 1.17 | DEthreader | GGHVGTSVEY-EDK--VTRGFN--------TDKKEKTITNEVFNFFYNNPQ---WNFMGFYSFKIENREQKENEDGIKQLFSLNKGHDLGGWATGLIYELEYTRSKVYS-VSGLRKN-LAEHSIRPYLTYWNNDNMGFYSNLEYLLSKEDRWGKRQEQGYSALFKPYKR-FGNWEVGVEFYYQIKTNDEEKSDFNERYIEPIVQYSFDDAGTLYTRVRVGKNETKNTSGGGNINYFKDIRKATVG-YEQSIGESWVAKAEY-EYANEVEKKEKSELTQ-HTFYAQALYR | |||||||||||||
7 | 3dwoX | 0.08 | 0.08 | 0.91 | 1.17 | DEthreader | KRIAQLTVNY-ADI--DIKYNGDAYDMNDGGQAGFG-AWLPTGFLVVPIN--DR-FAFGLSQVV---------K-ETIGLTGSLSFKVNDNFSLGAGVIIQRTSGF---------KVDNTSPGFFAGAVWKPTDRDTLGFAYHAKIRNLKGASARLDIPAYASLDWVHQFNDRLSLGASATWTEWSFQDPYTYRNTWTLAVGGDYKVTDQWTMRAGVAYDQTPTHNATR-DPRIPDGDRYFASLGAGYRFQSMPELSIDAAYSRQFVKVPLGRATSKGQVFSLSATYDF | |||||||||||||
8 | 3dwoX | 0.09 | 0.09 | 0.92 | 1.33 | DEthreader | RIAQLTVNYADID--IKY---AYDYGNPMNDGGQAGFGAWLPTGFLVVPI-NDRFAFGLSQVVP-G-R-T---TKIETIGLTGSLSFKVNNFSLGAGVIIQRTSGF-S-------KVDNTSPGFFAGAVWKPTDRDTLGFAYHAKIRNLKGASARLDIPAYASLDWVHQFNDRLSLGASATWTEWSFQDPYTYRNTWTLAVGGDYKVTDQWTMRAGVAYDQTPTHNATRDP---PDGDRYFASLGAGYRFQSMPELSIDAAYSRQFVKEVPLRATSKGQVFSLSATYDF | |||||||||||||
9 | 2jqyA | 0.10 | 0.09 | 0.90 | 1.31 | HHsearch | WHFNIGAMYEIENVEGYGEDMDGLA------EP----SVYFNA--A-----NGP--WRIALAYYQEGPVDYSARGTWFDRPELEVHYQNDDFSFGLTGGFRNYGYHYVDEPG-KDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYK--FANDLNTTGYRVETETGLQYTFNETVALRVNY-YLERGFNMDNGEFSTQEIRAYLPLTL-GNHSVTPYTRIGLDRWSNWQDD-IEREGHDFNRVGLFYGYDFQNGLSVSLEYA--FEWQDHDE-GDSDKFHYAGVGVNYSF | |||||||||||||
10 | 3dwoX | 0.07 | 0.06 | 0.89 | 1.17 | DEthreader | RIAQLTVN-Y-ADI--DIKYN---------GGQAGFGAWLPTGFLVVPIN-D-R-FAFGLSQVVP-----T--KIETIGLTGSLSFKVNDNFSLGAGVIIQRTSGFVS-----VKVD-NTSPGFFAGAVWKPTDRDTLGFAYHAKIRNKLKASARLDIPAYASLDWVHQ-NDRLSLGASATWTEWSSFQDPTYRNTWTLAVGGDYKVTDQWTMRAGVAYDQTPTHNATR-DPRIPDGDRYFASLGAGYRFQMPELSIDAAYSRQFVKEVPLGRATSKG-QVFSLSATYD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |