>PF04533 (214 residues) MASRWMEWTCCGLWLFGKPTQKKYTQLFEEPSYKCSERVKQEINKGLPPGVSVGDLILGD KSTEALNQAHLLALQSNNITEYLARFNAAEIPASCQGIVSNQIDKLKAMQSVIWNAMISI ATSNVELSDSGFQLLLDKQACENMTLMEMEKLATAISVDNTTNWAREISNIIITQPTHAL PEAVPEKPEPIYDDPEELESTMLLQPTQQKKTTV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MASRWMEWTCCGLWLFGKPTQKKYTQLFEEPSYKCSERVKQEINKGLPPGVSVGDLILGDKSTEALNQAHLLALQSNNITEYLARFNAAEIPASCQGIVSNQIDKLKAMQSVIWNAMISIATSNVELSDSGFQLLLDKQACENMTLMEMEKLATAISVDNTTNWAREISNIIITQPTHALPEAVPEKPEPIYDDPEELESTMLLQPTQQKKTTV | |||||||||||||||||||
1 | 6lqoH | 0.51 | 0.21 | 0.43 | 3.16 | HHpred | ----------------------------------------AEIDLGLPPGVQVGDLLRNEQTMGSLRQVYLLAVQANSITDHLKRFDAVRVPESCRGVVEAQVAKLEAVRSVIWNTMISLAVSGIEMDENG----------------------------------------------------------------------------------- | |||||||||||||
2 | 6lqoH | 0.51 | 0.21 | 0.42 | 1.57 | FFAS-3D | -----------------------------------------EIDLGLPPGVQVGDLLRNEQTMGSLRQVYLLAVQANSITDHLKRFDAVRVPESCRGVVEAQVAKLEAVRSVIWNTMISLAVSGIEMDEN------------------------------------------------------------------------------------ | |||||||||||||
3 | 6lqoH | 0.07 | 0.02 | 0.27 | 0.83 | DisCoVER | EQTMGSLRQVLAVQAN-------------------------------------------------------------------------------------ITDHLKRFDA-------------------VRVPESCRGVVEAQVAKLEAVRSVIWTMISLA---------------------------------------------------- | |||||||||||||
4 | 6kobA | 0.04 | 0.03 | 0.79 | 0.83 | DEthreader | LGAQVSIA-----T--IAIIFV------KWKW-LWS--W----------------------TVDKKLGIMYIISA-VIMLFRGGVDLM-AFLDNHYNEIFTTHGTIMIIMAMPFLIGLINVVPDVPLNNLSFWTFFVGAML---FNISFGSPNAGWTSYMY-LQAGIGTLMTGINFMTITWTTVIGTVFCFCFQRRNFSTVAFMGVGFLILN-- | |||||||||||||
5 | 5j65A1 | 0.09 | 0.07 | 0.75 | 0.44 | CEthreader | ILYPLIIKSANDIASYGF----KVAGDPSIDGYFKKLQDELDNIVDNNSDDDAIAKAIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHGYSQGQEAIKVFQKLQGIWATIGAQIENLRT--------TSLQEVQDSDDADEIQIELEDASDAWL-VVAQEARDFTLNAYST---------------------------------------- | |||||||||||||
6 | 5c9sB | 0.08 | 0.08 | 0.99 | 0.58 | EigenThreader | --DWTASILDQAPNSSVVWMNYMAFQLQLSEIEKARELAERALKTILNIWIAMLNLENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEKFDKAAELFKATAKKFGIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRK | |||||||||||||
7 | 3zh9B2 | 0.14 | 0.04 | 0.30 | 0.31 | HHpred | ----------------------------------------------------------------------------------------------------------KETTDFTVNLA---KTEQKTIGTEAAEHLVLLVNGHLSIFQEIQKLCTFIGDREEIT-LDDVKMLVAR---------------------------------------- | |||||||||||||
8 | 6lqoH | 0.51 | 0.21 | 0.42 | 0.95 | MRFsearch | -----------------------------------------EIDLGLPPGVQVGDLLRNEQTMGSLRQVYLLAVQANSITDHLKRFDAVRVPESCRGVVEAQVAKLEAVRSVIWNTMISLAVSGIEMDENG----------------------------------------------------------------------------------- | |||||||||||||
9 | 3e0sA1 | 0.10 | 0.07 | 0.73 | 0.67 | FFAS-3D | --------------------------LQLDAHASIHENVRRLLQFTTSIMEANEEGIRKDIDSEFLHD---FRVAIRRSRSILRLLNGV-FDPEKTAWMLAGLRELGKRTNDLRDSDVEYTSLLPPSLRPALDPFFSD--LEADKRLHHRQFCRYLTGREYSGFMTSLKEFI------AEGELPDPETAPLAAE-------------------- | |||||||||||||
10 | 6lqoH | 0.51 | 0.21 | 0.43 | 0.92 | SPARKS-K | ----------------------------------------AEIDLGLPPGVQVGDLLRNEQTMGSLRQVYLLAVQANSITDHLKRFDAVRVPESCRGVVEAQVAKLEAVRSVIWNTMISLAVSGIEMDENG----------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |