Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | SKTWDDDFVRQVPSFQWIIDQSLEDEVEAASLQVQEPADGVAIDGSLASFKLAIAPLEIGGVFDPPFDRVRWGSICDTVQQMVQQFTDRPLIPQAEMARMLYLDIPGSFVLEDEIDDWYPEDTSDGYGVSFAADEDHASDLKLASDSSNCEIEEVRVTGDTPKELTLGDRYMGIDEEFQTTNTDYDITLQIMNPIEHRVSRVIDTHCHPDNPDISTGPIYMERVSLARTEATSH |
1 | 4n2oA | 0.03 | 0.02 | 0.67 | 0.59 | DisCoVER | | --SSTADNNAVINVDENEAFKDV------------------PD-LEGEG-AHITLSNTT-----AKP----G---E-----------------AE--VT--SVS----------N-ADQWN-----CGIHIIYPDILK----PEKDPEERTVAFQKGDALCEWQPPVLKGCLFLGNQGGEGDATFRFKVPDNAEPGAVYNLGYYYNDLFINEIPTYQKYAFTHEGG-TITVEL- |
2 | 2d0vA | 0.07 | 0.05 | 0.76 | 0.67 | DEthreader | | NLMPGKEGAVNRLT-TQAPYIVVTAWRYYATGPDGTAWEGDAWKIGG-GTNWSGNP-------PWNETMRPGDN--KWTMTITARDMKFGYQKTP--FAGVNVIMLSLLTTLLISADK---------------LDDTVNVFKTVDLKT--G-LPVRDPYDICPSAMGHNQGGINHIYPGPK------------------SVWGGTL---LVFYGTLDGGVIGGWPVF-GL---- |
3 | 1vt4I3 | 0.05 | 0.05 | 1.00 | 0.49 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 4fjqA | 0.05 | 0.05 | 0.98 | 0.57 | EigenThreader | | WSGDRSSLWFRLMRKQGYFVTCDVFNNHKDESGVFKQSLKNHVEGLLELYEATSMRV---PG--EIILEDALVFTQSHLSIIAKDTLSINPALSTEIQRALKKPLWKRLDRIVECYFWALASRFEARIFLAKVIALVTLIDDIYDAYGTYEELKIFTEAIERWSDFVRVLMVEAQWLNEGHIPLDSIAVNLGGANLLTTTCYLGMSDIVTKEAFEWAVSELRYKGILGRRLNDL |
5 | 1vt4I3 | 0.13 | 0.07 | 0.54 | 0.41 | HHpred | | ---------------------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQY-FYSIGHHLKNI----------EHPERMTLFRMVFLDFFLEQKIRHDS--------TAWNASGSILNTLQQLKFYKPYICDNDKERLVN------AILD-FLPKIEE-NLICSKYTD-LLRIA----------------------------------------- |
6 | 4hfqA1 | 0.32 | 0.05 | 0.15 | 0.58 | MRFsearch | | -----------------------------------------------------------------PFDRERYEDLRSLLSEMLNQASD---LDSEEVAEVLK------------------------------------------------------------------------------------------------------------------------------------ |
7 | 1i97H | 0.05 | 0.03 | 0.57 | 0.38 | FFAS-3D | | ------------------------------------------------------------------MLTDPIADMLTRIRNATRVYKESTEVPASRFKEEIILAREGFIKGYERVEVDGKPYLRIHLKYGPRRQGPDPRPEQVIKHIRRISRPGRRVYVGVKEIPRVRRGLAILSTPKGVLTDREARKLGVGGELICEV----------------------------------- |
8 | 5yfpC2 | 0.09 | 0.08 | 0.88 | 0.74 | SPARKS-K | | LVAELAEDALETGCPHLLEIRDFQEQ--VVVMAKEATEDAQRTVMKLFSRLSGI---------ISKFD--KLLDGLTYDIVEMAR--AEQISLAIRLFKIYDLEEREDLRIEAIRNIIKKKEIEIEKSSIKKLPNSKNTARLQDETPKVIEY---------PTNKGLYQEIMSGTISTRTAPRGYKHFNGINNSISEM---FGEMREKYVGDQKFDVLDNMDWIELIIVKEHIA |
9 | 4c9bB | 0.06 | 0.01 | 0.23 | 0.40 | CNFpred | | -----------------------------------------------HVYAALVAIIN---SKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQ---------------------------------------------------------------------------------------------------------------------------------- |
10 | 3s4wA | 0.04 | 0.03 | 0.78 | 0.83 | DEthreader | | ----------EQVFDLLKVVMILEVVR-NS-VHSWDHVTQGLIEFGFILMDSYGPKKI----SKMTNQH-ACKLGANILLTFIRQEILEQVLRVPINHFL--------KVETYLFLPLQTV-------QGLLKVQLLLGPSSTQVVHSRYAVANETFCI--FDVRCHGPDGKIFQYPKVQFLVTTLSRLPLFSLVPLSQAEKLLVFLSIYSLTAFV------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|