>PF04503 (309 residues) EHSSEAKAFHDYGFVNSGYGVNGIAHNAGPAPSPLGQMPPNDGMPGGPMPPGFFQNNSTM RPSPPTHPSSQPSPQHPQPPPPPHSQMMSTQFMGPRYPAGPRPGVRMPQMANDFNGPPGQ PMMPNNMDPTRQGPPGMNPMNPRMNPPRGPGMGPMGPGSYGPGMRGPPPNSSLGPGGPGG PGMPPMSMAGPGGRPQWQPNTSAPMNYSSSSPGNYGGPPGSTGPPGPGTPIMPSPQDSSN SGGENMYTMMKPVPGGNMPGDFPMGGGPEGGPMGPMGPNTMGPVLNGDGMDGMKNSPANG GPGTPREDS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | EHSSEAKAFHDYGFVNSGYGVNGIAHNAGPAPSPLGQMPPNDGMPGGPMPPGFFQNNSTMRPSPPTHPSSQPSPQHPQPPPPPHSQMMSTQFMGPRYPAGPRPGVRMPQMANDFNGPPGQPMMPNNMDPTRQGPPGMNPMNPRMNPPRGPGMGPMGPGSYGPGMRGPPPNSSLGPGGPGGPGMPPMSMAGPGGRPQWQPNTSAPMNYSSSSPGNYGGPPGSTGPPGPGTPIMPSPQDSSNSGGENMYTMMKPVPGGNMPGDFPMGGGPEGGPMGPMGPNTMGPVLNGDGMDGMKNSPANGGPGTPREDS | |||||||||||||||||||
1 | 1mv3A | 0.08 | 0.02 | 0.28 | 0.68 | DisCoVER | ----------------------SQLRK--GPPVPPGSGAGRLDLPPGFMFKVQAQH-------------DYTA--------TDTDELQLKAGDVVLVIPFDEGWLMGVKEDWNHKKLCRGVFPE------------------------------------------------------------------------------------N--------------------FTERV--------------------------------------------------------------------------- | |||||||||||||
2 | 6etzA | 0.07 | 0.07 | 1.00 | 0.57 | CEthreader | RPIHYEGDWSSEHVDVYSRMYASQAETALIGQGIEPALNDAALDARRRAMPFVLCEYVHAMGNGPGGMSEYQALFEKYPRLMGGFVWEWLEHGITVSTADGVDHYGYGGDFGEEVHDGNFVTADRRPRPGLLDFKKVIEPLRIDVARDWTGFTLRNGQDFADTSAFSFRYEVEADGGALDGGTVDVAPVAPQSETVVELPGSVAALAAGLSDGRRAVLGADSAWADAGHEVAWGQSVREPGAPVPPAPVEPVQVQDSELTLGPVVFSRATGMPTSIGGVPVEKLGLTLWWAPTDNDLGREWGGADERPL | |||||||||||||
3 | 6tbmQ | 0.04 | 0.04 | 0.99 | 0.58 | EigenThreader | DSCPHLKQILTSVNVALALKLRNGNIPLYKTSDGSKVEYKKLARLRNKAVRCRECLESLSCQCSHVKNGHASAHTKSTGHVQTGYRCGGDQRLEFIRQSKQGERTEPIMNNLGTETIIDGSRPPSLKASTGLRGFINMGATCFMSSIVQTIVHNTKKMDTCITCCIDEIFKVFYGTDETKGYGPTALLTAAWRVKNSLAGYSEQDAHEFWQFLLDEIHELDDTSTCRCITHKTFAAKISKDKVTLNDCLDLFTSDSMTICSHCKKETTRPPASSSETHV---GFPLEPYTVSETLNSNEQGRASWGLMT | |||||||||||||
4 | 6scoA | 0.22 | 0.02 | 0.10 | 0.35 | HHpred | -FKDILKAYHEYKITSILLQFVSEA------SSTSGSIA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
5 | 1yq2A | 0.20 | 0.05 | 0.23 | 0.53 | MRFsearch | -----------------------------PGTAGAGSVLPSGETVEGVAAESY-------------------------------------------------------------------------------------------------------------------------------------------DDAAWDTLP---------VPSHWVMG----QDGKYGRPIY-----------------------TNVQYPFPID-----------------------------------PPHVPDANP | |||||||||||||
6 | 2xd8A | 0.12 | 0.12 | 0.97 | 0.55 | FFAS-3D | GGATDKYALYLFGEMFKGFQHETIARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSAFVYDLDETLAHYELRGEISKKASPVSATNFVEPGGTQIRVGSGTNESDAFTASALVMDEKGVSSQGRCAVLNPRQYYALIQDIGSNGLVNRDVQGSALQSGNGVIEIAGIH---IYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVN-----NDYGTNAELGAKSCGLIFQKEAAGGPQVQVTNGDVSVIYQGDVILGRMAMGADYLNPAA | |||||||||||||
7 | 3hr2A | 0.18 | 0.18 | 0.98 | 1.32 | SPARKS-K | GERGGGSRGFGADGVAGPKGPSGERGSGPAG--PKGSGEAGRGEAGGAKGLTGSGSGPDGKTGPGPAGQDGRGPAGPQAGVMGFGPKGTAGEGKAGERGVGPGAVGPAGAGAQGAGPAGPAGERGEQGPAGSGFQGLGPAGPGEAGKGE--QGVGDLGAGPSGARGERGFGERGVQGPGPAGPRGNNGAGNDGAKGDTGAGAGSQGAGLQGMGE-RGAAGLGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPGPGPTGARGAGDRGEAPGPAGFAGPGADGQGAKGEGDTGVKGDAGPGPAGPAGPGP | |||||||||||||
8 | 6hq6A | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | WAGALFPITGIQNI---------------RSELGIFAKANIAWS-G--PKYLVSS-LQLNH-----------------------FRNGK-I-GAYFLMIIANDITETIQNNK-----K-I-EDINTDIELGTLIELNASSDA-------------NTLFNIGGIFDNNYQISLNDLNALEYLPLKFSRRHGDRNNRWDHQTAKILRPEWNDANNLGVSMVTLYLRRIYHAYMELLYS-GYE-IYWHMVSKLQLAVLECCLKAVEE-GGIFVK-LELNPCLLEFLKEAKTFDLAFTYCQIPFRTGIINKI | |||||||||||||
9 | 2nbiA | 0.18 | 0.18 | 1.00 | 0.87 | MUSTER | PYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQLPYGDSSRPLDCTDPAVNRPLPTPQNINCPAFECRPDNPMFTPSPDGSPPICSPMMPSPEPSSQPSSDSARPPVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPS-AVTVPLTPAPSS | |||||||||||||
10 | 2bklB | 0.05 | 0.05 | 1.00 | 0.49 | CEthreader | RFKELFYTDSVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |