Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | ISSKISSDFDKQSALKVITGLNNFNIPQIKQMALASEIAKVTYLDIVADTDIIKEVESVSKIPICVSAVKSKELLKCQKTGVNILEIGNYDCFYEQGRLFHSEEIKLISKETRNLLPHATLCVTLPHILKIEEQVKLASDLQRIGIDMIQTEGKSTSISKTDHLSGMIQKSASTFSSTYTVSSKIRLPIISASGISSLTSPIAFLYGASGIGIGSNIRRLQDIGSMVIYIYEVQAAISSNHN |
1 | 2zryA | 0.14 | 0.13 | 0.95 | 1.33 | DEthreader | | ---KFFRKEISVPVMVTGMTGGRELGRINKIIAEVAEKFGIPMGVGSQARESFAIVRKVAPIPIIANLGYGKEFQDAIQMIADAIAVHLNPQEVGEP-EYQIYALEKLRDISKE-LS-VPIIVKESGNG-I--SMETAKLLYSYGIKNFDTSGQTNWIAEMIRRA---LDGVPTAASIMEVRYSVDSFLVGSGGIRSGDAAKAIALGADIAGMALPVLKSEGKESLEQFFRKIIFELKMSKD |
2 | 2prmA | 0.16 | 0.14 | 0.92 | 2.22 | HHpred | | ------------NPVGIAAG---FDKH--GEAVDGLYKMGFGFVEIGSNPVVEHRLRAEDGLPLGVNLGKAEDYAEGVRPLADYLVV-NVSSPNTAGLRLGKAELRRLLTKVLQERHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRSETGGLSGKPLRD-LSTQTIREMYALTRVPIIGVGGVSSGQDALKIRAGASLVQLYTALTF-WGPPVVGKVKRELEALLKEQGF |
3 | 1h1yA | 0.13 | 0.11 | 0.84 | 1.41 | FFAS-3D | | -------------AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMTIGAPVIQSLRKHTKAYLDCHLMVSDYVEPLAKAGASGFTFHIEVSR---------DNWQELIQSIKAK--GMRPGVSLRPGTPVEEVFPLVEA--ENPVELVLVMTVEPGFGGQKFMP-------EMMEKVRALRKKYSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVEG------ |
4 | 6e1jA | 0.08 | 0.07 | 0.93 | 1.33 | DEthreader | | EYIPNKLPDKNYVRFDTTRDEQALTPPQKIEIARQLAKLRVDIMEVGFEFETIQTIAKTVGPVICVIARKERDIKAAWESKAPRIVIFTSTSHLKYLKMEVVDMVASSIRFAKSLG-FEDIEFGCEDRSDKDYICTVFEEAIKAGATTLACPDT---V-------GINMP-HEYGKLVRYIKATIDVIFSAHCHNATANTIAGICAGARQVEVTINGIG-----APLEEVVMALKRGAFMGG |
5 | 1h7wD | 0.12 | 0.12 | 0.94 | 1.33 | DEthreader | | ---EMAGLK-FINPFGLASAAPTTSSSMIRRAFEAG--W-G-FALTKFWCQSVTELKADFPNIVIASIMCWELSRKAEASGADALELNL-SCPHGMLACGDPELVRNICRWVRQAVQ-IPFFAKLTPNVT--DIVSIARAAKEGGADGVTATNTVSGLMPWPAGVSGTAIRPIALRAVTTIARALPFPILATGGIDSESGLQFLHSGASVLQVCSAVQNQD-F-TVIQDYCTGLKALLYKPA |
6 | 3c56A | 0.09 | 0.09 | 0.93 | 1.62 | HHpred | | GNEILLKAHKEGYGVGAFN---FVNFEMLNAIFEAGNEENSPLFQASEGAGMVKIMCERPHIPVALHLTTFESCEKAVKAGFTSVMIDASHHAFEENL----ELTSKVVKMAHNA--GVSVEAELGRLMVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFK-----GEPKLDFERLQEVKRLTNIPLVLHGASAIPDNRQSVKGGINKVNTDTDLRIAFDLRFFSPAQLALKNVVKER-- |
7 | 5zknA | 0.19 | 0.16 | 0.84 | 1.38 | FFAS-3D | | --NKILESIRGK----LIVSCQALSSFIMGRMAYAAYSGGAAGIRAN-TVEDIKEIKKNVSLPIIGIIKKIKEVEDLINEGVQIIAIDATKRERPDRKD-----LKNFIAEIKEKYPNQLFMADISS-------VDEALYAEKIGFDIVGTTLV---------GYTDYTKNYKALEELKKVVKVVKIPVIAEGNIDTPLKAKALEIGAFAVVVGGAITR------PQQITKKFVDEMK---- |
8 | 6e1jA1 | 0.08 | 0.07 | 0.93 | 1.33 | DEthreader | | EYIPNKLPDKNYVRFDTTRDEQALTPPQKIEIARQLAKLRVDIMEVGFEFETIQTIAKTVGPVICVIARKERDIKAAWESVKPRIVIFTSTSHLKYLKMEVVDMVASSIRFAKSLG-FEDIEFGCEDRSDKDYICTVFEEAIKAGATTLACPDT---V-------GINMPHE-YGKLVRYIKATIDVIFSAHCHNATANTIAGICAGARQVEVTINGIG-----APLEEVVMALKRGAFMGG |
9 | 3i68A | 0.15 | 0.14 | 0.95 | 1.33 | DEthreader | | ---NIKHLD-FINPFGVAAGFDKNGVC-IDSILKL---G-FSFIEIGIVTENLILFRRQLSHIVGVSIGLKYCINKIGRY-ADYIAINVSSPNTPGLRNQEAGKLKNIILSVKEEIDKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQIFNKKGGVSGAKLKDISTKFICEMYNYTQIPIIASGGIFSGDALEKIEAGASVCQLYSCLVFNG-M-KSAVQIKRELNHLLYYYN |
10 | 1vlwB | 0.13 | 0.11 | 0.80 | 1.35 | FFAS-3D | | --MKMEELFKKHKIVAVLRA---NSVEEAKEKALAVFEGGVHLIEITFTDTVIKELSFLKEKGAIIGVTSVEQCRKAVESGAEFIVSPHLD--------------EEISQFCKEK--GVFYMPGVMT-------PTELVKAMKLGHTILKLFPGEVVG----------------PQFVKAMKGPFNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEKIRG--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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