Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | NPTITSIIEGKTILSDLYTTITYTPTATHGANNKKVHHGLSKKNRNIVIGCVVGIGVPLIVLTLFLLYVFCIRSPKTDFINSDGKVITAYRPNKITKWWNALMGREITEEYQSKSPLGGEASDFEDSELAYADDDDESLSYGASNMDS |
1 | 6lnpB | 0.04 | 0.04 | 0.97 | 0.81 | DisCoVER | | LAELDGDVNGHKFSVSGMPEGYIQERTIFFKGDGNYKTRAE---VKFTLVNRIELKGGQRALIQAMISTIKIDATYITVGDASGQRLYHVALINAKGYVSVGKSPILDATRVVGIVSVGYTLVYIKAGIKANAYHYQQNTPIGDNHY- |
2 | 4kvjA | 0.05 | 0.05 | 0.86 | 0.83 | DEthreader | | LLYNLLAVGRSS-G-N----WWWDGSVVEHNCLYRKTSAA--VGLKKP-NNHVPYSLT--EEFTSVYRMHSLENYPSFRLPQNRRILAAEVYDRSVPRYNEFRRRLF---IPIDLLLVGLMAEKKIKFSETAFNIFIA----SFSA-- |
3 | 1vt4I3 | 0.07 | 0.07 | 1.00 | 0.54 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 4ktpA | 0.06 | 0.05 | 0.98 | 0.57 | EigenThreader | | ASEEDYQNPDGSGRTFPLSLEYSSNPQDEALLEAKHMQSYEEEKAANRLEWDNLWSHYDALRFNIYHAIIATPLPIGARGLSCQAYQGAAFTLDGARRKAKRLGYEGAYYAWISGKTGDELC---PDFFFKDVLSGRDIRNHFNDWQI |
5 | 3mk7C | 0.20 | 0.07 | 0.34 | 0.36 | HHpred | | -----------------------------------------------------YIALLTLGTIVALFWLIFATRKGESAGTTMGDGIEEYD-NPLPRWWFLLFGT------------------------------------------- |
6 | 2kluA | 0.10 | 0.03 | 0.32 | 0.55 | MRFsearch | | --------------------------------------------RGSMALIVLGGVAGLLLFIGLGIFFSVRSRHRRRQA------------ERMSQIKRLLSE-------------------------------------------- |
7 | 2kluA | 0.08 | 0.03 | 0.45 | 0.39 | FFAS-3D | | ------------------------------------GPLVPRGSM---ALIVLGGVAGLLLFIGLGIFFSVRSRHRRR------------QAERMSQIKRLLSEKKTSQ---SPHRFQKT---------------------------- |
8 | 5yfpE7 | 0.06 | 0.05 | 0.84 | 0.72 | SPARKS-K | | ---------KKKQNYIQSVELIRRYNDFYSMGKSDIVEQLRLSKNW------KLNLKSVKLM-------KNLLILSS--KLETSSIPKTINTKLVIEKYSEMMENELLENFNSAYRENNFTKLNEIAIILNNFNGGVNVIQSFINQHD |
9 | 2shpA | 0.12 | 0.06 | 0.49 | 0.50 | CNFpred | | LRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVL--MDAGPVVVHCSAGIGRTGTFIVIDILIDIIREK-------------------------------------------------------------------------- |
10 | 6v9iC | 0.05 | 0.04 | 0.84 | 0.83 | DEthreader | | ------------DDKGPAKHKLTNIFIKNRLQDMVYSTEYCALVTSFKETILAECQGMIDEHISAGLADMVAAAETITTD------SE-YV-EQLLTLFNRFLVKDLDELLVLKKDMKPADYILRLRTQALIQILIYIRRDESDI--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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