Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VSKRCSHNYPQVVVTAPILDKGSNIGIFPTTFWLTCPELNYQISKLEEEGWIKKIQDKINANQQLATALGAAHQDYARYRLNLISEQKLDDLEKNYTGQYLVLKESGVGGILEFDGIKCLHTHYAHYLATDNNPVGRLVD |
1 | 4jdyA | 0.08 | 0.06 | 0.72 | 0.78 | DisCoVER | | GVIMDVVGAGAVAVTNLGEALRRISAMIRSKGEA-----------------G---T--GD--------VSNAT--HMRAIGGEIAKELQ-APYELVAEVA-KLPVTLFTAG-GIADAAEGVFVGAAAIVKA---TTFFD- |
2 | 5ocdA | 0.08 | 0.06 | 0.82 | 0.83 | DEthreader | | SQIHFITILVDDQTIGIMN----HATTELY--AVGIMRWDDWYNSPNYINSHLRVQKEYDTNKAFQNAIHANIDDFLTRYLSR-FS--PA-D-------V--DHERFRLCLD----YLIEECSVM--YSGRNAMATYLIL |
3 | 3zxuB | 0.07 | 0.07 | 1.00 | 0.52 | CEthreader | | VTVTCEKDMILLRKSFRIAVENESIRSMAIDLNAFEVELQPIIQYAEDTQNVNVAMMAVVQFLRIKELHEQMISKIVEASKFIRASNNTITLNDLEVSFHCYWNLPSPYPETLILTNKVQKILDFLIYQYGIQLGVIKYG |
4 | 7bujA | 0.10 | 0.09 | 0.84 | 0.60 | EigenThreader | | ALESKGSWPPFYLVPKNAK--DGNSFQGETWRLSSHTEKYILNNKECLKLMKYLLEQLKKEFQELDYHVKTAIFHMWTQD-----------------PQDSQWDPRNLSSC----FDKLLAFFLECLRTEKLLFLSKKIE |
5 | 1og4A | 0.19 | 0.14 | 0.76 | 0.26 | HHpred | | ---------PLMLDTAPN--------AFDDQ-YEGCVN------KMEEK-APLLLQEDFNMNAKLKVAWEEAKKRWNNIKPSGFNDFHGTYTGSIAVDFNRAVREFKE--NPGQFHYKAFHYYLTRALQLLSNG------ |
6 | 6ec8A | 0.17 | 0.12 | 0.73 | 0.45 | MRFsearch | | ----------VAVRECGL--------PVSAIESLCCTDSFALIRRQVREAWLKGEGKRLAVDAARVADWVTRMRALTRARRELPERVKEKVLAQVDPGFRRALSLA----------SPELAADLDRWLAE---------- |
7 | 1kijA2 | 0.16 | 0.09 | 0.53 | 0.48 | FFAS-3D | | ----LLEGLYAVVSVNPQFEGQTKGK-------LLNPEAGTAVGQV----VYERLLEILEENPRIAKAVYEKALRAAQAREAARKAREL--------------------------------------------------- |
8 | 5cwmA1 | 0.09 | 0.07 | 0.79 | 0.72 | SPARKS-K | | --------DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAEAKKVLEQAEKEPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQG---------------------- |
9 | 2vc9A | 0.11 | 0.09 | 0.81 | 0.51 | CNFpred | | ----------SIINARPGFGIKSASTWGHSKIVYDKSEFEKAIEIFA------KNYDEFKDSDAFLYDFADILKQLLANSAQEYYEVMCNAYNNGGEKFKFVSGKF-----------LELIKLQERVLSTREFLIGNWIE |
10 | 5ocdA | 0.07 | 0.06 | 0.84 | 0.83 | DEthreader | | GQHFICT-ILVDDQTIIMNH---ATT-ELYLAVEGLIMRWDWYNSPNYINSHLRVQKEYDTNKAFQNAIHANIDDFLTRYLS-RFS--PA--D-----VDHERA-FRLCLD-----YLIEECSVM--YSGRNKAMATYIL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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