>PF04368 (182 residues) MRIKLPHVPYIAHKIAIDLLNCGFVKLNKGVEPIVAKASEILTADVQKERALEERVNELL EKNEDEMQTMQIDRKNMFWLIKKKLANDFGVILTHEDRFSDVAHKILETTWKSSLIDYNV SENRVKNVIYGSIDEYLKIYEKIEDEVLEKIDNYKRKLIPGTEEYDLVFERLYQDELRKR GM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MRIKLPHVPYIAHKIAIDLLNCGFVKLNKGVEPIVAKASEILTADVQKERALEERVNELLEKNEDEMQTMQIDRKNMFWLIKKKLANDFGVILTHEDRFSDVAHKILETTWKSSLIDYNVSENRVKNVIYGSIDEYLKIYEKIEDEVLEKIDNYKRKLIPGTEEYDLVFERLYQDELRKRGM | |||||||||||||||||||
1 | 6pieA | 0.02 | 0.01 | 0.59 | 0.58 | DisCoVER | VDLI--ELDIHFRIEDDLYYP-ALSAAL--IAVAHAEHRQVI--QLSVLLRT--------------------------------PQSEPGYEE-----WNSFKTVLEAHADEERDMPEVITDAELEELGEKMAARMEQYRGSALYKL----------------------RAAL--V------ | |||||||||||||
2 | 6wjvA | 0.04 | 0.03 | 0.76 | 0.83 | DEthreader | ASMPNIMTTN-RLQPDSI-KA--------CQREN-PFYVDTVKSFRDRRYEFKGLAKTWKGNLSDPHARDEAKK--MIVLYDSLQLA--HKVILN-SFYGY-V------------------RKGSRWYSMEMAGITCLTGATIIQMARALVERV-G-R-----PLELGIWCI-PCS-LNIFF | |||||||||||||
3 | 2dvmA3 | 0.12 | 0.07 | 0.62 | 0.52 | CEthreader | -------NNLLGFPGIFRGAL--DVRARTITDSMIIAAAKAIASIVEEPSE-----------------------------------ENIIPSPLNPIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYENVIAPINKKRREYSKAITRA------------------------- | |||||||||||||
4 | 5n6xA | 0.08 | 0.07 | 0.94 | 0.72 | EigenThreader | LHGNAIKLIH-------FLFRHKIIKFKTEFHEAYQQFVTIYEQYDDMVQEYLEKITNAQQRILDIEQKLSLATEANLQMAEKSKAGLEEKLSGLKTRLPSCIERFNKFMT----QIEINDIDFLYQNLLLEQEELRSLVERAYKIRMAASQLGVTYNDSTKEALAETIDQLNAQLQIYMKN | |||||||||||||
5 | 4ddtA | 0.16 | 0.07 | 0.43 | 0.37 | HHpred | ---------STYAKIVEVLFRRGYVYEDYKPTRFGVMVYSYLKERY--EKYVTEETTRRLEEIMDKVERGEEDYQATLRLLYEEIKSLME-------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3szrA | 0.09 | 0.08 | 0.96 | 0.47 | MRFsearch | --HICKSLPLLENQIKETHQRITIPEDENEKMFFLIDKVNAFNQDITALIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFENQAAAAVDMLHTVTDMVRLAFTDVS----IKNFEEFFNLHRTAKSKIEDIRAEEREGEKLIRLHFQMEQIVYGASMEEIFQHLMAYHQEASKRIS- | |||||||||||||
7 | 3ljbA | 0.06 | 0.05 | 0.94 | 0.82 | FFAS-3D | ---KMFFLIDKVNAFNQDITAQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFE-NFVNYRTFETIVKQQIKA---LEEPAVDMLHTVTDMVRLAFTD-VSIKNFEEFFNLHRTAKSKIEDIREQEREGEKLIRLHFQMEQIVYSMEEQHLMAYHQEASKRISSH--- | |||||||||||||
8 | 5cwjA | 0.11 | 0.09 | 0.86 | 0.79 | SPARKS-K | --DSEEEQERIRRILKEARKSGT-----------EESLRQAIEDVAQLAKKSSEVLEEAIRVILRIAKESGS--EEALRQAIRAVAEIAKE-AQDSEVLEEAIRVILRIAKESGS-------EEALRQAIRAVAEIAKEDPRVLEEAIRVIRQIAEESG--SEEARRQAERAEEEIRRRAQ- | |||||||||||||
9 | 7jh5A | 0.12 | 0.12 | 0.98 | 0.65 | CNFpred | ----LEAIARLQELNLELVYLAVELRIRDEIKEVKDKSKEIIRRAEKEIDDAAKESEKILEEAREAISGSSELAKLLLKAIADLNLRAAKAFLEAAAKLQELNIRAVELLVKLDPATIREALEHAKRRSKEIIDEAERAIRAAKRESERIIEEARRLISELARELLRAHAQLQRLNLELLRE | |||||||||||||
10 | 4av3A | 0.04 | 0.04 | 0.88 | 0.83 | DEthreader | SFVGIVSSIILASYMFPI-YVQ---LVHQVPKETIQALISYPIFFALVGLGCSMLGILYVIVK-KPS-DNPQRELNISLWTSALLTV-VLTA-----F--LT-YFYLKDLQ----GLDVLGFRFGSYFAGLYGVAIAIFAALLFGAITYYFSGYLAVA--SDALM-PAFAILKIMSVVSVIV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |