Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MEYVALTGIAENVMRELKNDTLRTVEIRSPHNFFTALKLNVGDFVFLTHTSIQDLTSGTTGVVARIMKHQISTHRTFSSTETFYEERETTTARIQLDPRASARVRKVHSNDIGEITRV |
1 | 3m65A1 | 0.10 | 0.08 | 0.81 | 1.17 | DEthreader | | RSIPLLP-LRGL-L--VYPTMVLHLDVGRDKSVQALEQAMHDHMIFLATQQEDEIF--TVGTYTKIKQMLKLP---------------NGTIRVLVEGLKRAHIVKYNEH-EDYTSVD |
2 | 3m65A1 | 0.10 | 0.08 | 0.81 | 1.17 | DEthreader | | RSIPLLP-LRGL-L--VYPTMVLHLDVGRDKSVQALEQAMHDHMIFLATQQEDEIF--TVGTYTKIKQMLKLP---------------NGTIRVLVEGLKRAHIVKYNEHEDY-TSVD |
3 | 2ar1A | 0.12 | 0.12 | 0.95 | 1.05 | MAPalign | | -HYWLLKSEPHKFIDDLAKQKTSPWGVRNYAARNNMRAMSVGDKVLFYHS---NTKEPGVAGLAEVVRAYDDFT--ALDKTSEYFDKEKNWKMVDVKFVARWVLTLMALQRRLSVQPV |
4 | 3m65A | 0.10 | 0.08 | 0.81 | 1.17 | DEthreader | | RSIPLLP-LRGL-L--VYPTMVLHLDVGRDKSVQALEQAMHDHMIFLATQQEDEIF--TVGTYTKIKQMLKLP---------------NGTIRVLVEGLKRAHIVKYNEH-EDYTSVD |
5 | 3m65A | 0.10 | 0.08 | 0.81 | 1.17 | DEthreader | | RSIPLLP-LRGL-L--VYPTMVLHLDVGRDKSVQALEQAMHDHMIFLATQQEDEIF--TVGTYTKIKQMLKLP---------------NGTIRVLVEGLKRAHIVKYNEHEDY-TSVD |
6 | 5guqA | 0.12 | 0.09 | 0.77 | 0.33 | HHpred | | RKEAVIS-LWPEFAKAIVSGK-KTVEFRRRI-----PLPALSARIWIYATRP------VKSVIGFAYLEAIVQGDVLWSEQDYFEGTEATAFLLR-------DHQPI------RPIN- |
7 | 4ci1B1 | 0.13 | 0.11 | 0.83 | 0.74 | DisCoVER | | QVIPVLVMV----M--LIPGQTLPLQLFHPQEVSMVRNLIKDRTFAVLAYSNVEREAH-FGTTAEIYAYREEQ------------EYGIETVKVKAIGRQRFKVLEIRTQSDIQQAK- |
8 | 2kkuA | 0.13 | 0.07 | 0.53 | 0.48 | MRFsearch | | --VGVTYPIPKRFMDRFFKK-GKDVFVKP---ATVWKELKPGMKFVFYQSHE------DTGFVGEARIKRVVLSE------------------------------------------- |
9 | 2hd9A | 0.11 | 0.09 | 0.87 | 0.59 | SPARKS-K | | MTYWICITN-RENWEVIKRHN--VWGVP------TLSRVKPGDKLVIYVRQEKDKEGNLLEPIYEVTSEP------YVDFSRIFKPHETYPYRVKIKPIKIGEINFKPLINDLKFIKN |
10 | 3eopA | 0.13 | 0.13 | 0.97 | 0.97 | MAPalign | | -SHWLMKSEPEKFSIDLKAQQTTCWGVRNYQARNFLRAMKLGEEAFFYHS---NCKEPGIAGLMKIVKEAYPDHTQFEKNNPHYDEDNPKWSMVDVQFVRMMIPLMVLTRQRLSIQPL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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