Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LFLLLLLIIGYIANNQSLMIAVSFLLIVKLIGLDTKIFPSLQKNGINWGVTVITIAVLVPIATGEIGFKQLLDSLRSPYAWIALVSGISVAIIAKQGLSLLANDPHITTALVFGTILAVSFFKGVAVGPLIGAGIAYLLM |
1 | 3j9tY | 0.11 | 0.07 | 0.66 | 0.64 | DisCoVER | | YGTAKSGVGICATLRPDLLFKN-------------------------------V--PVIMAGIIAIYGLVVSVLVTGFIQLGAGLSVGLSGLAA--------------GFAIGIVGDAGVRGSSFAELGLYGLVALLLN- |
2 | 3hfwA | 0.07 | 0.06 | 0.87 | 0.83 | DEthreader | | YAMVLSAAGDALGYESDDTVMHLATAEALVEALYYLLAKLWRIPNHEGGCGAAMRA-MCIGLRFPHHQLDILEAKKIVVNLQHWSYFQTKWENYLKLRG-ILDGE-----PMIAYAVLRAFFHGGDS-ST---------- |
3 | 5tqqA1 | 0.06 | 0.06 | 1.00 | 0.43 | CEthreader | | PFVHLSVMIAAYLKRNEMLVAGAAVGVATVFAAPFSGVLFCIEVVSFSVWDYWRGFFAATCGAFMFRLLAVFNPFDLPEIFFFVALGAICGVASCAYLFCQRKFLGFVKTNPVLSKLMATSKPLYSALAALVLASVTYPP |
4 | 7cq5C | 0.08 | 0.08 | 0.98 | 0.70 | EigenThreader | | PMIHSGSVIAAGISQGDFVSAGAAAGVSAAFGAPVGGVLFSLEEN---QFLTWRIFFASMISTFTLNFVLSIYHTIHEIPVFIAMGVVGGVLGAVFNALNYWLTMFRIRYGAAWGRLFGISLPGKYALMGAAAQLGGIVR |
5 | 4n7wA | 0.11 | 0.09 | 0.79 | 0.28 | HHpred | | -------MLVKITRLFPVWALLLSVAAYFRP----TTFTGI-GPYVGPLLMLIMFAM-----GVTLRLDDFKRVLSRPAPVAAAFLHYLIMPLTAWILALFRMPPDLSAGMVL-----VGSVASGTASNVMIY------- |
6 | 7jm6A | 0.09 | 0.09 | 0.98 | 0.25 | MRFsearch | | --IPIFIFMGVVGGILGALFNALNYWLTMFRIRHRPCLQVIEAVAAVTAAVGFVMIYCSRAFFN-TPEKSVVNLFHNPMTLGMFTLMYFFLACWTYGLTVSVFIPSLLIGAAWGRLFGISLSYLADPGKYALMGAAAQLG |
7 | 3wdoA2 | 0.17 | 0.16 | 0.91 | 0.67 | FFAS-3D | | --LLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYL-----ATMLIAFGSVVPFAEVKRKMKQVFVFCVGLIVVAEIVLWVVGVQLFFVAFNLMEALLPSLIGTAMG-VYSTSQFLGVAIGGSLGGWID---- |
8 | 6w4sF | 0.10 | 0.10 | 0.98 | 0.87 | SPARKS-K | | AKFLLYLGHSLSTWGDRMWHFAVSVFLVELYGNSL---LLTAVYGLVVAGSVLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKHELLTMYWVLTSCYILIITIANIANLASTATAITIQRDWIVVV |
9 | 6z16D | 0.17 | 0.14 | 0.82 | 0.82 | CNFpred | | PTPVLALFGGLLTKVGVYSILRTFTLLFTH------DAAYTHTLLAWLALGTIIIGVIGAVAY-----NDMRYIV--IYNIIAAVGVMIFGISI--------MTPESVEGTIFYLLQDMVMK----AMLFLFVGIIFSIT |
10 | 6ihkA | 0.07 | 0.06 | 0.86 | 1.00 | DEthreader | | PLISSLIDHAARHGWEIAANARRMGSALT-KLGLQDRIG--TL-AW-NNRRHLEIYYAASGAGFVFDENSHRSTVLH-SFAS-NTIGYSAMD-V--VM--PVVPMHNAWGSPYGCAMS-------GAQMVLAMRTVIVHA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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