>PF04245 (318 residues) ILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRVFNSKAGKGFGVFKTESEFGHWL SSVRKNETSFLEFSNNSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVAVLPSNESM KVTEQLDISATDYLDIAKMDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVSDFFLDFLQ ADVGMDTKVQNQVLMQAVEDFCADERLDKEEKQQYRKQVYDYCNGQLQAGEELTVKELAS ELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDAMLLGERVF YDPETDTLTIKGTPPNLK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRVFNSKAGKGFGVFKTESEFGHWLSSVRKNETSFLEFSNNSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVAVLPSNESMKVTEQLDISATDYLDIAKMDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLDKEEKQQYRKQVYDYCNGQLQAGEELTVKELASELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDAMLLGERVFYDPETDTLTIKGTPPNLK | |||||||||||||||||||
1 | 6s8bI | 0.06 | 0.03 | 0.50 | 0.75 | DisCoVER | LVNILEFSAISLTSIVYQSNPLLISRNFKLDGEKVRNYFKYTIVDVEITTRT--RAL--I-------------G--VS--T---SL-GKLIFGS-GISFDP---YMNLPYIPASIKVRSYIEGKLGEQEAEEIFGGNVNFTDAYPTRSLFV-TIAPKVTFRFLIYYK--SMPIILIRASLFELRK-------------------------------------------------------------------------IEVIKA------------------------------------------------------ | |||||||||||||
2 | 2e1vA | 0.06 | 0.04 | 0.63 | 0.67 | DEthreader | EQSQVSPPDTLGD---------------------------SPPINNLFFY------E--LP--ITRSQFTETVVPNIKHSLSITLKHFYPVGDSVAVTFAECNLDLLFDLVPILGESTR-------------IKI--PLFSVQVTLFP-NQG-----IAIGITNHLGDSTRFCFLKAWTSA---ILSSFTVACAYIWSCIAKSRNDK--KTNLLIGITAAKLIGENLHKTLTD------DL-VSE-GP-TTTW-SIDHNGAISI------EDL--------------------HIFDDGL------------------ | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.06 | 0.99 | 0.74 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5l4kU | 0.05 | 0.03 | 0.70 | 0.62 | EigenThreader | RVVGVGSWQKKVSNSFAVPFDDK-------------------------------------------DDSVWFLDHDYLENMYGMFKKVNARERIGWYHTMKRYCPNSVLVII---DVK-----PKDLG-----------LPTEAYISVEEVHDDGTPFEHVTEIGA--EEAEEVGVEHLLRDIKD-------------------TTVGTLSQRITNQVHGLKGLNSKLLDIRS--YLEKVATGKLPINHQIIYQLQDVFNLLPDVS---LQEFVKAFYLKTNDQMVVVYLASLIRSVVA-------LHNLINNKIANR | |||||||||||||
5 | 2o4tA | 0.08 | 0.02 | 0.24 | 0.27 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVEKLPKDYQIVYKEIQKYLKVGPVELNEGIGLLSEILGFFEEGAAAGKGVDVAAFCDALIGDSKADLYQESIQQH------------------------------------------------------------ | |||||||||||||
6 | 4l11A | 0.11 | 0.05 | 0.47 | 0.42 | MRFsearch | ------------------------NPLRQRLEEYFQHAWTYTNGIDMNSVLQADICLHLNRNLLNNCSAFEAASPGCLRALSLKFKTTHAVLTYLYFIARGSEILKDDVVMAILGKDDIFGENSNSNVKAL-------------------------TYCDLHKIHR-------------------------DDLLDVLDLF-------PEFYDSFVNSLEITYNMRDEE----------------------------------------------------------------------------------------- | |||||||||||||
7 | 4xgtA1 | 0.09 | 0.06 | 0.65 | 0.66 | FFAS-3D | -------------------------PQLERELISLQQERDAIIIPD----------ESIVKDYYGVRQQLEEYNKDMVFVIQHPQNCLGFFQEGRLIHIKSPSGVDYGWGVLIKQRQTPKNGQPPYPEQESYVLDVLLKVEVVPCLLNC----------LRALGQLR-----------VFLPKRLESADEKDGVGKAVDEISRRFGINDDSFKKLLRKI-EVLESRLVANPLHNSPLLVELWNQYSLKMQLGEQIKEKKKAIARA----------------------------------------------------- | |||||||||||||
8 | 6gkwA | 0.11 | 0.10 | 0.85 | 0.58 | SPARKS-K | IIAVL-KDAKALGLNEIHEEDIDLSAENKEYINLALG--NVNTPNKVYVIEGEADIQTALDFLETKEFNYLADKTAIKNWIIKLRDIDKVK-----VKAVLGKVVGNHEGIINFTTEDV--LVGEKKYS----VDEFTSRVAGLIAGTPLSQSVTYTKLLILIKEAGAIRIARG-VNSLTELTAEKGEDTLDIIHSDIRKVIIDDTNSYDNKCLLIVAIKSYLEELEKSA----------LIESDSTFEAQKSYLKSKGVDLSYT----LQEIKEA-----NTGSLKAKIK-------VL-DAEDIDLSIEI------ | |||||||||||||
9 | 3q7jA | 0.13 | 0.08 | 0.60 | 0.65 | CNFpred | ---------------------------YEEFRKGISKYLNDH---KFGNAEG-SDLWTAIEDVS--GKPVKRVMEYWIKN------------PGYPVIKLKRNGRKITMYQTRFL-PVPVNIKKVERILLEDEASIE-ADGLIKINADSA-------GFYRVLYD------DATFSDVMGHYRDLSP-LDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDD-------EDHNVITAIVGQMEYLMLTHAFDDDARAF------------------------------------------------------------ | |||||||||||||
10 | 4bxsV | 0.03 | 0.02 | 0.70 | 0.67 | DEthreader | FIAAEEITWKYKKAFRQYEDGN------------------------------------------------FT-KPTY-AIWPKER--G--I--L-GPVI-KAKVRDTVTI-F-NASRPYAVEPG-QVYTY-SAVDMTIGLIGPLLCALSGVQN-KADVEQHAVFAVFMYTLNGYADR-EVLRWHLTFQDILNL-------IAAEIFRSTGGELLGPIIR--A--EV----D-D---VI-E-I-QFKN--SLHSSEGRSYDDDWQVPRSGPTCKSWPFVLI-----QLQGLWHLHVVNFHGQPSK-IGTWLLEQGMQAL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |