Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | WLQLLQRGQHYMKTWPAEKQLAPIFPENRVVRATRFGIRIMPPLAVFTLTWQIALGGQLGPAIATALFACSLPLQGLWWLGRRSVTPLPPTLAQWFHEIRHKLLESGQALAPLEEAPTYQTLADVLKRAFNQLDKTFLD |
1 | 3qf4A1 | 0.11 | 0.09 | 0.79 | 0.72 | DisCoVER | | LKPYWIFAVLAPLFMV-----------------V--EV-ICDLSQPTLLARIVDEGGDFSLVLKTMLIVALIGAVGCTVFASYASQNF----GADLRDLFRKVLSF-RLTNDVTQLQVML--RIVVRRVLEVLNEKP-- |
2 | 6t15a | 0.09 | 0.07 | 0.83 | 0.83 | DEthreader | | ----F---MLIG--GFGNY-LLPLMADTAFPRINNIAF-WVLPMGLVCLVTSTLVESGAVDLAIFALHLTSISSLLGAINFIV----MHKLPLFVGSHVVSTYILALYAFLFT------L---AFSLFAGYYYSPINFS |
3 | 5mkkA1 | 0.11 | 0.11 | 1.00 | 0.61 | CEthreader | | TLVGLLGFMLFLSPKLTLVVLLVAPVLLAVTTWVRLGMRSAYREMRLRLARVNAALEKFDRLNRDLFRAWVEIIRWFALFFPVVGFLGDFAVASLVYYGGGEVVRGAVSLGLLVAFVDYTRQLFQPLQDLSDKFNLFQG |
4 | 5msjA | 0.04 | 0.03 | 0.77 | 0.68 | EigenThreader | | LQRLKPEIKDVTEQLNLQIPFELMTNLHTKLEGFHTQISKYFSERGDAVAKAAKQ-PHVGDYRQLVHELDEAEYQEIRLMVMEIRNAY----------------------------AVLYDIILKNFEKLKKPRGE--- |
5 | 6n3qA | 0.19 | 0.14 | 0.74 | 0.28 | HHpred | | ------------------RALVAFLPNMFQVLMTVAITSNTPIMLQSALTSNIFLISILIKTIVYITFLGSCAVFSKTWIEISGT---SP------RDIAKQFKDQGMVING--KRET--SIYRELKKIIPTAA----- |
6 | 4pl0A | 0.07 | 0.06 | 0.98 | 0.48 | MRFsearch | | --VISNKASVFLFMILQSSLRINMQKKMSLKYVRNVSQNILSPVIQLISTIVVVLSTKDWFSAGVFFLYILVFVIFNTRLTGSLA-SLRKHSMDITLNSYSLLSDTVDNMIAAKKNNALRLISERYEDALTQENNAQKK |
7 | 6h7wQ1 | 0.18 | 0.17 | 0.96 | 0.75 | FFAS-3D | | -LSPKQYYELYMAVFDALRYLSAHLRENHLYELVQYAGNIIPRLYLMITVGTAYMDGAPVKELMKDMMDMSRPVRGLFYLSGQARDYLPLTNFVEMNKLWVRLQHQGHSRERDLRTQERRELQLLVGSNIVRLSQ---- |
8 | 5cwjA | 0.10 | 0.09 | 0.94 | 0.71 | SPARKS-K | | SEEEQERIRRILKEARKEESLRQAIDVAQLAKVLEEAIRVILRIAKESEEALRQAIRAVAEIAKEASEVLEEAIRVILRIAKESGSE--EALRQAIRAVAEIAKEAQDP-------RVLEEAIRVIRQIAEESGEEARR |
9 | 1biqA | 0.13 | 0.12 | 0.91 | 0.68 | CNFpred | | YDELIEMTSYWHLLGVSLRELKKKLYLCLMSVNALEAIRMYVSFACSFAFAERELMEGNAKIIRLIARDAALHLTGTQHMLNLLSGADDPEMAEIAEECKQECYD------------LFVQAAQQEKDWADYLFRDGSM |
10 | 6qd6A1 | 0.11 | 0.09 | 0.82 | 0.83 | DEthreader | | -TNDAQNLLTQAQTVNTLKDCFGAFAASDMINNAQKIVQETQQLSANQPKMALALINQVNNLNERAKTLASPAYQATLLALRSVLG-WN--S--MGYAV--ICG-GYTNQKDFHYTD-------I-----ADKNV---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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