Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ETDPLHEPDEETVSHIDLSNMISEEEREELKTELVKLEDEITTLRQVLTAKEKHLVEIKQKLGMNLMNELKQNFSKGWHEVQTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMRNSPTFKSFEERVETTVTSLKTKVGGTSSGGNFEEVLSSTAHASA |
1 | 3na7A1 | 0.04 | 0.01 | 0.27 | 0.62 | DisCoVER | | ---------------------------------------------------------------------------------------------------LALKLQVSKNEQTL-------------------QDTNAKIIQRSLNIEEAKRSNQANREIENLQ- |
2 | 1xdpA | 0.11 | 0.09 | 0.80 | 1.00 | DEthreader | | NLEFYKV--A-LK--IIIEEQGS-NS-H-SRHLLGKIQSRVLKADQEFDGLYNELLLEMARNQIFLFNVGKANLVNKP--LP----RLRYYHTFEHVLELLRQASFVAANGKK----------R-TEAG-VHVIF-SA-LKI---H-AKLFLIAVRRVDYLMV- |
3 | 4uy3A | 0.07 | 0.07 | 0.98 | 0.51 | CEthreader | | RKNEIETLPFDQNLAQLSKLNLKGETKTKYDAMKKDNVESTNKYLAPVEEKIHNAEALLDKFSFNASQSEIDDANELMDSYEQSNEIIALYKDNDELYDKCKVDYREMKRDVLANRHQF--GEAASLLETEIEKFEPRL-EQYEVLKADGNYVQAHNHIAALNE |
4 | 5owvA | 0.06 | 0.06 | 1.00 | 0.52 | EigenThreader | | AKMASDFYKGLASKESLQKSGMQEFENYLFNEAYKKELHLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSIAKIDNLVLLLAKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILREIKFENIKKIEELKTNLS |
5 | 1av1A | 0.14 | 0.12 | 0.82 | 0.37 | HHpred | | --------------------PYLDDFQKKWQEEMELYRQKVEPLRAELQEGRQKLHELQEKLSP-LGEEMRDRARAHVDALRTHLAYQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKPALEDLRQGLLPVLESFKVSFLSAL--EEYTKKLN------- |
6 | 2lemA | 0.14 | 0.11 | 0.80 | 0.53 | MRFsearch | | ---------------------ETDWVRQEMNKDLEEVKQKVQPYLDEFQKKWKDVELYRQKAS-PQGAELQESARQKLQELQGREFRDRMRTHVDSLRTQLAPHSEQMRESLAQRLAELKSNPTLNEYHSSAKSHLKSLGEKAR------PALEDLRHS----- |
7 | 3na7A1 | 0.10 | 0.07 | 0.70 | 0.81 | FFAS-3D | | -----------------------EPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREI-ENLQNEIKRKS--EKQEDLKKEMLELEKLAL------------------------ |
8 | 4uosA | 0.14 | 0.13 | 0.99 | 0.77 | SPARKS-K | | --GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEILKKAKEMAEKILKMVILKKAKEMAEKILKKVKELEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENEDSEKILKKAKEMAEKILKMVILKKAKEMAEKILKKVKELGV |
9 | 4k1pA | 0.14 | 0.10 | 0.70 | 0.59 | CNFpred | | -------------------------QTREAALRIQQKQKELLPLIQKLSQTEAEATQITFV--EDQVSSFTELIDRQITTLETLTDWKVLNNNMIQIQKNVEEGTYTDSSLLQKHFNQIKVSDEMNKQTNQFEDYVTNVEVH---------------------- |
10 | 1vw1A | 0.05 | 0.04 | 0.77 | 0.83 | DEthreader | | FRQVAKAAAAYL-IYVRALIRFFIDWDKYNKRY--------------SRFDSYLWEIQRN-NAEAELKQIDAQLKSLAVRREAAVLQKTSLKTQQEQTQSQLAFLQRKFSNQALYNWLRGRL--AAIYFQFYDLAVARCLFIKP-G------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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