Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VCLYADALEAGMRVPLHGFFCDVLAHFGIAPTQLAPNGWRILAGFLVLCHSAGVPPSLPVFRHFFLL |
1 | 2wssA | 0.07 | 0.06 | 0.90 | 1.00 | DEthreader | | ----KG-IRPAIVLQEQVAVIYAGVRGYLD--LEPSKITKFENAFLSHVISQQALKLKEIVTNFLAG |
2 | 1d3uB2 | 0.09 | 0.07 | 0.82 | 0.59 | DisCoVER | | GLSVRRRAIEILDEASPAG---LVAA----ALYIASLLEE-KRTQREVAEVARVTEVT-VRNRY--- |
3 | 7jgrG | 0.06 | 0.06 | 0.97 | 1.00 | DEthreader | | RLNSETQNLL-KSRLLDVFPPVTLQLLAA-VSGDVRRALDIGRRVVEIAEQQKRKVQVTQVAAVLNK |
4 | 3m03A | 0.04 | 0.04 | 1.00 | 0.64 | CEthreader | | NIGIRDLAVQFSCIEAVNMASKILKSYEVDLDLSRPLFTSAALLSACKILKLKFDRLCKQLEKIGQQ |
5 | 6h49A2 | 0.05 | 0.04 | 0.99 | 0.72 | EigenThreader | | ILHRISDEKGYSPTFGKFYVNKAYYNDGDIYYSSYD-LYDETIKLLELLKESKINIDYDYVLKLYKQ |
6 | 5j83A1 | 0.11 | 0.10 | 0.91 | 0.25 | HHpred | | -----SMAALGMALSGNAAIVQMVKD-DLKPSEIMKQAFENAIHLLAIAGRVGIDLSLDDWDRCGRD |
7 | 4yv6A2 | 0.08 | 0.07 | 0.97 | 0.38 | MRFsearch | | --SQISRFERGESEISCSRLLNLLDKLNITIDEFVTNKTLVTQLSINCLIISIDYSYFDHSHYLIEK |
8 | 3peuB2 | 0.09 | 0.09 | 1.00 | 0.43 | FFAS-3D | | LSLFAIITRLQLPFPIALSWHILARICNTPLNLITNTHFVILGSWWDAAAVQFLQAYGNQASKLLIL |
9 | 2zg6B1 | 0.16 | 0.13 | 0.82 | 0.67 | SPARKS-K | | ----------GFKPVFYEKVYQVLKDNGYDLDL--RKVFRAYAKPKDFLYILGIYPSERLVKELKEA |
10 | 2va8A | 0.13 | 0.12 | 0.93 | 0.59 | CNFpred | | --KVALIMKDWMDE---VDEDTILSKYNIGSGDLRETMDWLTYSAYHLSRELKLNEHADKLRILNLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|