Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FKSYYLSVIEEPPEVTSVDVHVEDLIRKYEQDEGKQLDELFKESCTPGKPKHGEHYEKTELKHGDKMFHKFLKRLQRCPEQCIRYDRNGDPLLVSVMDSSLTIPKCPYCGCQRIFELQLLPSLIPWLKTENGSDVEIDYGTVMIYTCQNNCWPPSSDPNCTLTVMEEFIMVQ |
1 | 6w2vA2 | 0.07 | 0.03 | 0.53 | 0.59 | DisCoVER | | --AVSAAAE---------------A----------------------------VKKAALLHPSEA--AQ-AA--L----ELAKAAAEAVLIACLLAL----DYPKSDIAKKCIAASAAEEASAAAQHPD--SQKARDEIKASAEVKCER-------------------AQ-- |
2 | 6kobA | 0.02 | 0.01 | 0.72 | 0.67 | DEthreader | | ISVMLG----------MIIFMAMPFLIGLINVVPVMTGIMIVAFPWGHEVYIVILPAFGSISFSFTTPMLWALAFIPNFVIG---------------------------------YLIVFACFAGFIFWYPKMFGHK--FFIFMGFNICFFPQYF--LQGML-ISVGMMGFL |
3 | 1pv5A | 0.10 | 0.09 | 0.87 | 0.51 | CEthreader | | FRVIYFENIVENDDELVSDFSFIGTGECDFPILSEAAVEPVKSSEWVLPTDFQFEQYTGETEFFGQFGEDEEDIYNELAENGFGHKIGGYASFTQHDPREYAYK-------EHTILLQIDSDDDIDS--------WGDVGIANFFITPEDLRKKD--------FSNVLYNWD |
4 | 4twaA1 | 0.04 | 0.03 | 0.78 | 0.68 | EigenThreader | | LNVENS---------YFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYSVFPKWIWYEEYLAVPIIKGIK----------SEGEKFGG-----ANFTSTAEAFIS----------ENGRAIQAATSHYAKMFKIEEN----EVKQYVHQTSWGC |
5 | 3eswA | 0.18 | 0.13 | 0.74 | 0.32 | HHpred | | -----------PRGSIDFDSIAKMLLIKYKDFILSKFKKNLVHTNQQGQSQLCTVYDNPETLDLDLIYKNVDKEFAKDGHELLR--------YFKQDFKWCNKPDCNHCGQNMTPLGSQGPNGE-ES--------KFNCGTVEIYKCN-RCGNITRF--------------- |
6 | 6dk4A | 0.15 | 0.10 | 0.68 | 0.48 | MRFsearch | | -------------------PQRLCVLKILKRHEHPNIDELYIE------------IKKEYPSISLATVYKNLNTLQEQ-GLVVEINVLNQKTCYDIYEEEHIHVVCTKCG--GIEDLSFDAKLYEYQEHLEKKNLVNHLSVCAYVDNCKKC--------------------- |
7 | 5c5tA | 0.18 | 0.14 | 0.80 | 0.39 | FFAS-3D | | ----YYEKIDG----FLSDIECDVLINAAIK--------------KGLIPKSRNSEQTWFMPGEHEVIDKIQKKTREEDVQVARYKPGQ----YYYHHYDGDDCDDACPKDQRLATLMVY-----LKAPEEGGGGETDFGTSIFFW---VADPVTRKLYKETLHAEKIIAN- |
8 | 4kmaA2 | 0.11 | 0.09 | 0.85 | 0.67 | SPARKS-K | | AGVNADFTFRELKPTKEVKEEVQALSEKCANREEPSFPQSMSMSSNFQAQAPNCISLDGAPGVAKYLLLAIKDRIRHGR--HFTFKAQHLALTLVAESVTGSAVTVNEPYGVLGYWIQVLIPLVPRLMEDEKCEPELEWLKLIIDQPE------------------------ |
9 | 5x2mB | 0.04 | 0.02 | 0.66 | 0.58 | CNFpred | | WNWVAVVGSEE--------EYGQQGVQQFSKKAED-------------GVCVAYQGLIPIYDDPKPAIQTIINNIQTTVKVVVVFSLVAVSFFEEVI------------NLTGVWIASSSWAISDKVYSLPNI--DSIGTVIGFIDETE----------------------- |
10 | 5azbA | 0.09 | 0.06 | 0.72 | 0.83 | DEthreader | | ----SYLHFPEFDIWLMYLVGFIFAMWLATRRANKVENLLGVIVMIFFSDFIAPLI-PFGLGAGR--LGNFINGE-----FAMLFP---GSRT----EDILLLQTN----PQWQFLPRHPSLYELLLVLIILIGYGFRVEFFR--------------------------QPA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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