>PF04165 (389 residues) ASSSLALLFSIAVVLILIRKVNIGLAIFVGSAILAYLTLGADGLLVMLKSLANPQTIEIV VIVILAFTLGYSMEYFGMLEKVTGGLSESFGVYSFLLIPLLIGLLPMPGGALISAVMLGP LTKMYRISPEKATLLNYWFRHVWVTFWPLYPSVIIGAAVVNVDYFHFAAATFPIGVFALT AGLTLTRGMERRFRVSRNLFDSLINLYPIAILLILSVLLRLDLLLALVVAIAAVSIHNRA KLEDFREIFRRTVDKKIILLVFAVMVYKSVIQNSGAAESLFTDISLGFPAPAAAFLLTLL VGFATGIEMSYSSIALPLLTSFTGSGIVVAKNLMLVIAAGYIGVMLSPMHLCYILTAEYF GTEIGKTYRQLLAIAGITAALVWIAYLVI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ASSSLALLFSIAVVLILIRKVNIGLAIFVGSAILAYLTLGADGLLVMLKSLANPQTIEIVVIVILAFTLGYSMEYFGMLEKVTGGLSESFGVYSFLLIPLLIGLLPMPGGALISAVMLGPLTKMYRISPEKATLLNYWFRHVWVTFWPLYPSVIIGAAVVNVDYFHFAAATFPIGVFALTAGLTLTRGMERRFRVSRNLFDSLINLYPIAILLILSVLLRLDLLLALVVAIAAVSIHNRAKLEDFREIFRRTVDKKIILLVFAVMVYKSVIQNSGAAESLFTDISLGFPAPAAAFLLTLLVGFATGIEMSYSSIALPLLTSFTGSGIVVAKNLMLVIAAGYIGVMLSPMHLCYILTAEYFGTEIGKTYRQLLAIAGITAALVWIAYLVI | |||||||||||||||||||
1 | 6wtwA | 0.09 | 0.09 | 0.98 | 1.33 | DEthreader | GGLSVQAWEMFAIFVATIVGCTTLLGMVVTVLVGLA----VVNSKGVVIQTG----S-GNSAAWLIAMAFIMAHGISLGNRVAYVMIEKFKRIGIGYAITLELMGSNSARTGVTWPVVESISKSYSKIGAYLDFMAFHANILSTALFTGAAPNLVAQQMAAQMSWSWFWAALVPVLVATVIIPLVIYKPKETAWAKLMISPEKIMATVFCLAILLWVLSFFKIPQLVFLAVTLLLITGVLSMEDALHETAWNILIWLSILIFMAGKLISYGFIAWFAKFIQSEVHGINLVLVVLILLMFYTHYFFASGTAHMTALYLPFLTVATAGAPLGLSAMLLAFTGVINASTTHYANPASILATTGYVKQSEWWKMNFILGLIYMVIFGIVGTIM | |||||||||||||
2 | 6wtwA | 0.11 | 0.11 | 0.97 | 1.33 | DEthreader | GGLSVAWEMFAIFVATIVGCGTTLLGMVVTVVGLAP---VVN-VVIQTG-LS----G--NSAAWLIAMAFIMAHGISLGNRVAYVMIEKFGSGIGYAITGLELMISNSARTGVTWPVVESISKSYSKIGAYLDFMAFHANILSTALFTGAAPNLVAQQMAAQMSWSWFWAALVPVLVATVIIPLVIYKPKETAWAKLMISPEKIMATVFCLAILLWVLSFFILDFVAFLAVTLLLITGVLSMEDALHEGAWNILIWLSILIFMAGKLISYGFIAWFAKFIQSEVHGINLVLVVLILLMFYTHYFFASGTAHMTALYLPFLTVATAGAPLGLSAMLLAFTGVINASTTHYANPASILATTGYVKQSEWWKMNFILGLIYMVIFGIVGTIM | |||||||||||||
3 | 6wtxC | 0.11 | 0.11 | 0.96 | 2.82 | HHpred | -NVVLGISMLAFIAVLWLTALHVTVTAILVPVMAVFFIFETQ---AALNNFAN----SIIFLFLGGFALAAAMHHQGLDKVIADKVLAMQKMSVAVGVTALLSMWINTATAAMMLPLVLGVLSKVDADKQRVLLGVAYSASIGGIATLVGPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPFAPVNWDKGKVVTLGIFGLTVFLWIFSSPDTLVALGAI-LMLSFARVVHWKEI----QKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDHMGIFVVVATFVVFLTEFA-SNTASAALLIPVFATVAEAGMSPVLLSVLIAVAASCAF-MLPVAPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
4 | 6okzC | 0.13 | 0.12 | 0.95 | 1.22 | DisCoVER | HNVVLGISMLAFIAVLWLTELHVTVTAILVPVMAVFFGIF--ETQAALNNF----ANSIIFLFLGGFALAAAMHHQGLDKVADKVLAMSVAVFMLFGVTALLSMWISNTTAAMMLPLVLGVLSKQRSTYVFVLLGVAYSASIGGIATVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYLLK--PTNW--DKGKVVTLGIFGLTVFLWIFSSSFDTLVALGAILMLSFAV-V---HWKEIQ-KTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALVMGIFVILVVATFVVFLTE-FASNTASAALLIPVFATVAEFGMSPVLLSVLIAVAASCAFMLPVATPPN-AI--VFHIKQSEMMRVGLYLNIACIGLLTAIAML- | |||||||||||||
5 | 6wtxC | 0.11 | 0.11 | 0.97 | 0.52 | MRFsearch | --VVLGISMLAFIAVLWLTELHVTVTAILVPVMAVFFGI--FETQAALNNF----ANSIIFLFLGGFALAAAMHHQGLDKVIADKVLAMVAVFMLFGVTALLSMWINTATAAMMLPLVLGVLSKVDADKQRVLLGVAYSASIGGIATLGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTLNVNWDKGKVVTLGIFGLTVFLWIFSSSFDTLVALGAILMLSFARVVHWKEIQKTA----DWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMMGIFVVILVVATFVVFLTESNTASAALLIPVFATVAEAGMSPVLLSVLIAVAASCAFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
6 | 6okzC | 0.11 | 0.11 | 0.97 | 2.24 | SPARKS-K | HNVVLGISMLAFIAVLWLTELHVTVTAILVPVMAVFFIFETQAALNNFAN-------SIIFLFLGGFALAAAMHHQGLDKVIADKVLAMGKMSVAVFMLFGVTALLSTATAAMMLPLVLGVLSKVDADYVFVLLGVAYSASIGGIATLVGPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTNWDKGKVVTLGIFGLTVFLWIFPINAALGGFLVALGAILMLSFARVVHWKEIQKTA----DWGVLLLFGGGLCLSNVLKQTGTSVFLANAMVSHMGIFVVILVVATFVVFLTEFNTASAALLIPVFATVAEAGMSPVLLSVLIAVAASCAFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
7 | 6wtwA | 0.12 | 0.12 | 0.98 | 1.53 | MAPalign | VQAWEMFAIFVATIVGCITPLPIGGTTLLGMVVTAVNSKGVVIQTGILSSF----GNSAAWLIAMAFIMAHGISKTGLGNRVAYVMIEKFGSIGIGYAITGLELMGASARTGVTWPVVESISKSYKKIGAYLDFMAFHANILSTALFITGAPNLVAQQMAQMSWVSWFWAALVPVLVATVIIPLVIYPEVKETKEMGPIKPEKIMATVFCLAILLWVLSGLDSAFVAFLAVTLLLITGVLSMEDALHE--TGA-WNILIWLSILIFMAGKLISYGFIAWFAKFIVHGILVLVVLILLMFYTHYFFASGTAHMTALYLPFLTATAMGAPLGLSAMLLAFTGVINASTTHYAGPASILATTY-VKQSEWWKMNFILGLIYMVIFGIVGTIW | |||||||||||||
8 | 6wtxC | 0.11 | 0.11 | 0.97 | 1.02 | CEthreader | HNVVLGISMLAFIAVLWLTALHVTVTAILVPVMAVFFGIFE--TQAALNNFAN----SIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQVFMLFGVTALLSMISNTATAAMMLPLVLGVLSKVDADYVFVLLGVAYSASIGGIATLVGPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPTAPVNWDKGKVVTLGIFGLTVFLWIFSKSFDTLVALGAILMLSFARVVH----WKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSVVILVVATFVVFLTEFASNTASAALLIPVFATVAEFGMSPVLLSVLIAVAASCAFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
9 | 4r0cA | 0.14 | 0.14 | 1.00 | 1.16 | MUSTER | HPTLLFVWFCLLLLPLTAV-LGALDVTATHPTITAHSLLDADGLRYLFTTLVGFTGFAPLGVVLVAMLGLGVAEQSGLLSVSLASLVRRSSGVFTVAFAGVLSSLTVDAGYVVLIPLAGLVFQLAGRPPIAGIATAFAAVSGGFSLLVGPVDATLAGLSTEVAATGNYWFIIASTFLVTGLVTLITRTLTEPDAPQIHSRAMKWTGLTLAILLAGLALLVLVALIAGICGAVYGRVSGQFNSGAVITAMEVTMAAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGLLLLFVVLTALINLMIGSASAKWSILAPVFIPMLMLGISPEASQAAYRVGDSSTNIITPLMPYFVLVLGFARTGIGTLIALMLPYSLTLLLGWSVLLGVW | |||||||||||||
10 | 6wtxC | 0.11 | 0.11 | 0.97 | 4.50 | HHsearch | HNVVLGISMLAFIAVLWLTALHVTVTAILVPVMAVFFIFETQ---AALNNFAN----SIIFLFLGGFALAAAMHHQGLDKVIADKVLAMQKMSVAVFMLFGVTALSNTATAAMMLPLVLGVLSKVDADKQRVLLGVAYSASIGGIATLVGPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLLKPGEPVNWDKGKVVTLGIFGLTVFLWIFSSPFDTLVALGAILMLSFARVVHWKEI----QKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDHMGIFLVVATFVVFLTEFA-SNTASAALLIPVFATVAEAGMSPVLLSVLIAVAASCAF-MLPVAPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |